Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02171 atgatcccactggagatcTCCCAGAGCTCCATCAGGACCTACCTCAGCAATAAGGAGGAAGCTCGGAGATCCGAGCTCGATATCATCGAAGAAGTAAGAGACATCGCCACATTGAGACAACGCGCAGCACAACACGCAATAGCCCGCCAATACAACAAATCAGAAAAAAGCAGATCATTTGTGAAAGGAGACTTAGTACTTCGAAGAACGAAAATAGTTTGGAAACCACCCTCACATggcaagctcgcagcaaattgggacggtccatactggatatcagaagtactcggcaatggagcatacaaactcgaatcaatagatgGGTTTCAGCACCAGCTCTCAGTGACGCTCTCCACTCCTCGTGATCCACCGCACCGATCAATTTCGCCGTTCCGCCCACGATTCCCTTTTGTTTTGCTTGCTCAGGGCAAAAGGGTTGCTTTGCTTGCAAACAAAGTCCCTGAGGAAGATGAAGATATCTTTGAGGGACATGTTGTCGAAGAGTACCATGCACCAGAGGAACGTGTTGAAAGTGCAGTTGACATAGCACGCCGGGAGCGCGAAGAGAGAAAACAACGATTGAAGAGAGAACGCTCTGATGACAGACCTGGGCATTTATCACAGTCACGTGGATATGATCAGTTGTTTCAAACTAAGGCCCTTAAATCATATGATAAAAGTAGGCTTCCACCAGGTTGGTTGGATTGCCCTTCATTTGGCCAGGAAATTTTTGGTATGATACCTTCTAAGGTTCCACTTGGTGAATCATTCAACGACTGCATTGCTCCTGGTAAAAGATACTCATTTAAACAAGTGATACATCAGATGAGAGTCTTAGGGAGAAAACTTGGCTTGGTAATTGATTTGACAAATACTACTCGGTACTATCCAGTGTCAGATTTAAAGAAAGAGGGTATTAAGCATGTAAAGATCCAATGCAGGGGGCGCGATTCGGTACCTGATAATTTGTCTGTGAATCAATTTGTCTATGAGGTCACACAATTTGTATCACGTCAAAAACACTCAAAGAAGTATATACTTGTTCACTGTACTCATGGACATAATCGTACTGGATACATGATTATCCATTATCTAATGCGTACTACATCAATGTCTGTTACTCAGGCAATAAAAATATTTTCTGATGCACGCCCTCCAGGAATCTACAAACCTGATTACATTGATGCATTATATGCATTTTATCATGAAAAAAAGCCTGAAATGGTAAATTGTCCTCCTACTCCAGAATGGAAGAGATCTTCTGAACTTGATCTCAACGGTGAAGCAGTTCCAGATGATGATGATGATGGAGAACCAGTCCCCCATTTGAATGAGAACCATGAGACAGACACTCGGTTGACAAATGATGATGTTTTGGGAGATGAGATACCTTCTGATCAGCAGGATGCATTCCGGCAGTTCTGTTATCAAACACTTAAATTGGGTGTTGGGCCCAGGGGACATGCACAATTTCCAGGTTCACATCCAGTTTCTCTTAACAGGGAGAATTTGCAGTTGTTACGACAACGTTATTATTATGCAACATGGAAAGCTGATGGTACAAGATATATGATGCTAATAACGATGGATGGGTGTTACTTAATTGATAGAAATTTCAACTTTCGAAGGGTCCAAATGAGGTTTCCCTGCAGGGGTACAGAGGGTTTGGGCGAGAAGACCCATCACTTCACATTACTTGATGGTGAGATGATTATAGATACATTGCCAGATTCACATAAGCAGGAGAGAAGATACCTTATATATGATCTGATGGCAATCAACCATTTATCAGTGATAGAGCGACCCTTCTATGAACGGTGGAAGATGCTTGAGAAAGAAGTAATTGAACCTAGAAATACGGAAAGGCAACATATTTTCCAGAGCAGGAACCCTTACTACAGATATGACCTGGAACCATTTAGGGTGAGGAGGAAAGATTTTTGGTTGCTCTCTACTGTCAGTAAGCTTTTAAAGGAATTCATTAAAAAGCTTTCACATGAGGCAGATGGTCTCATATTTCAGGGCTGGGACGATCCATATGTACCACGAACTCATGAGGGCCTGCTAAAATGGAAATATGCGGAGCTGAATTCAGTGGATTTTCTCTTTGAGGTCGATGATGATCACCAGCTACTTTTTCTCTATGAACGTGGAAAGAAGAAACTAATGGATGGGAATCGGGTTGCATTTGGAGATGATTCAGATCCCGCTGATTATTCTGGAAAGATCATAGAGTGCTCTTGGAATTCTGATAATCAGGAATGGGTATTCTTGCGAGTGAGGACAGATAAATCAACTCCGAACGAGTTTAATACATACAGGAAGGTTATGCGAAGTATTAAAGATAACATCACTGAGGAGGACTTGTTGAACGAAATAAATGAGATAATTCGCCTTCCCATGTATGCTGACCGTATAAAAGCCGACAGTAAAGCCACTCAGCATGCTATTATGGCAAGGCGAAATCGAAGTAACAGGCCTTCCATTGTTTGGGAAACTATCCAGCTCATGGTTCCTCCCTCGTTAGCACTTGAGAGGTCACTACTTTGCTATTTCTAA 2559 0.4045 MIPLEISQSSIRTYLSNKEEARRSELDIIEEVRDIATLRQRAAQHAIARQYNKSEKSRSFVKGDLVLRRTKIVWKPPSHGKLAANWDGPYWISEVLGNGAYKLESIDGFQHQLSVTLSTPRDPPHRSISPFRPRFPFVLLAQGKRVALLANKVPEEDEDIFEGHVVEEYHAPEERVESAVDIARREREERKQRLKRERSDDRPGHLSQSRGYDQLFQTKALKSYDKSRLPPGWLDCPSFGQEIFGMIPSKVPLGESFNDCIAPGKRYSFKQVIHQMRVLGRKLGLVIDLTNTTRYYPVSDLKKEGIKHVKIQCRGRDSVPDNLSVNQFVYEVTQFVSRQKHSKKYILVHCTHGHNRTGYMIIHYLMRTTSMSVTQAIKIFSDARPPGIYKPDYIDALYAFYHEKKPEMVNCPPTPEWKRSSELDLNGEAVPDDDDDGEPVPHLNENHETDTRLTNDDVLGDEIPSDQQDAFRQFCYQTLKLGVGPRGHAQFPGSHPVSLNRENLQLLRQRYYYATWKADGTRYMMLITMDGCYLIDRNFNFRRVQMRFPCRGTEGLGEKTHHFTLLDGEMIIDTLPDSHKQERRYLIYDLMAINHLSVIERPFYERWKMLEKEVIEPRNTERQHIFQSRNPYYRYDLEPFRVRRKDFWLLSTVSKLLKEFIKKLSHEADGLIFQGWDDPYVPRTHEGLLKWKYAELNSVDFLFEVDDDHQLLFLYERGKKKLMDGNRVAFGDDSDPADYSGKIIECSWNSDNQEWVFLRVRTDKSTPNEFNTYRKVMRSIKDNITEEDLLNEINEIIRLPMYADRIKADSKATQHAIMARRNRSNRPSIVWETIQLMVPPSLALERSLLCYF 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02171 852 MobiDBLite consensus disorder prediction 436 451 - -
Aip02g02171 852 CDD Adenylation_mRNA_capping 491 693 IPR001339 GO:0004484|GO:0005524|GO:0006370
Aip02g02171 852 Gene3D Protein tyrosine phosphatase superfamily 225 438 IPR029021 -
Aip02g02171 852 MobiDBLite consensus disorder prediction 187 209 - -
Aip02g02171 852 MobiDBLite consensus disorder prediction 425 451 - -
Aip02g02171 852 Pfam mRNA capping enzyme, catalytic domain 495 692 IPR001339 GO:0004484|GO:0005524|GO:0006370
Aip02g02171 852 ProSitePatterns Tyrosine specific protein phosphatases active site. 348 358 IPR016130 GO:0016311|GO:0016791
Aip02g02171 852 ProSiteProfiles ATP-dependent DNA ligase family profile. 585 720 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Aip02g02171 852 PANTHER MRNA-CAPPING ENZYME 145 821 - -
Aip02g02171 852 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 229 417 IPR029021 -
Aip02g02171 852 Coils Coil 180 200 - -
Aip02g02171 852 CDD RNA_5'-triphosphatase 232 398 - -
Aip02g02171 852 ProSiteProfiles Dual specificity protein phosphatase domain profile. 256 407 IPR020422 GO:0006470|GO:0008138
Aip02g02171 852 Gene3D - 731 799 IPR012340 -
Aip02g02171 852 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 326 395 IPR000387 GO:0016311|GO:0016791
Aip02g02171 852 Pfam mRNA capping enzyme, C-terminal domain 697 790 IPR013846 -
Aip02g02171 852 Pfam Dual specificity phosphatase, catalytic domain 282 401 IPR000340 GO:0008138|GO:0016311
Aip02g02171 852 SUPERFAMILY Nucleic acid-binding proteins 695 807 IPR012340 -
Aip02g02171 852 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 456 693 - -
Aip02g02171 852 PANTHER MRNA (GUANINE-N(7)-)-METHYLTRANSFERASE-RELATED 145 821 - -
Aip02g02171 852 Gene3D DNA ligase/mRNA capping enzyme 454 692 - -
Aip02g02171 852 SMART dsp_5 242 403 IPR020422 GO:0006470|GO:0008138
Aip02g02171 852 MobiDBLite consensus disorder prediction 187 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02171 Aip-Chr2 91926827 91942922 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02171 148 814 Protein tyrosine phosphatase (PTP) family AT3G09100 70.623 0.0 943
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02171 K13917 - gmx:100776633 1181.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g02171 02 91926827 91942922 Aip02g02171 02 91926827 91942922 ECH