Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02169 ATGACGCGTTTTGTGTTTTATCTTGCATGGGCTTTTGCAACAATTATGCTAGTAGCTTCTTCATTATTGGCTTCTGCTGCTGTTGTGGAACACACTTGGGATGTTGAGAACTTCAGTGTGGAGCGTTTGTGTAATCAGCATGTAATAACTGGAGTCAACGGAACCTTACCAGGGCCAGGAATTGAGGCTCAAGAGGGTGACACTGTTATTATTCATGTTAATAACAAATCACCCTATAATGTTACTATTCATTGGCATGGAATATTTCAACTTGCGAGCCAATGGTCAGATGGTCCAGAATACGTAACTCAATGTCCAATAGGTCCTGGTGGTAGTTACACATATAATTTCACAATAACAGGACAAGAAGGAACACTTTGGTGGCATGCGCACTCCTCTTTCCTACGTGCCAATATCTATGGATCCCTTATCATTAGGCCTTCAAAAGGCAGATCATATCCATTCTCTCAAGTTCACCAAGAAGTACCCATATTGCTCGGGGAGTGGTGGAATGATAATGTTGAGGACATTGGAAACAATGCATCAAAAGGAATAGCTCCGAGAAACTCAGATGCTTACACAATTAATGGCTTGCCTGGCGATTTCTATAATTGTTCTCAAAACCAGACTTACCGGCTGAACGTGGAGCAAGGAAAAAGGTACTTGTTGCGAATTATCAATGCTGCACTGAATGAACAACACTTCTTCAAGATTGCAAACCACAGTTTCACAGTTGTAGCCATTGATGCTGGGTACACTAGAGAGTATAAAACGGACGTTATAGTATTGGCACCGGGCCAAACCGTTGATGCAATAATCACAACAAACCAAAGAGTGGGTTCTTATTACATGGCATTCAGCCCATACCGTTCCTCAAATGTAAGAAACGATACCGCAATTGCAAGGGGAGTGATTACTTATGAGGGTGCATCTTCAACATCAGCACCTATAATGCCAAACCTGCCAGATGCACATGATACGCCAACAGCACACAAGTTCTACTCTAATCTCACAGGGTTGGCTGATGGTCCTCATTGGATTCCAGTTCCACGTAAGGTGGATGAAAACATGTTCATCGCATTTGGAATTGCCCTAACCGTATGCAACCTTCCAGGACCAAGTGCATGTTTAAATGCCTTTGGGGTAAACTCACCATTCTCTGCAAGCATGAACAATGAGTCATTTGTGTTGCCTACAGGTAGAGGCTTCTCTATGTTGGAGGCATTCTACCGCAATGTTAGTGGGGTCTACACTAAAGATTTCCCAAGTCAACCTCCACTTGTGTTTAACTATACTGACCCTTCTTTAGAAACCAACACTAGCAATCCCTTGATCTTTGCACCTAAATCAACAAAGGCAAAGACATTGAAGTTCAATTCAACTGTGCAAATTGTGCTTCAAAATACAGCTATACTTGGCACCGAGAACCATCCTATTCATGTTCATGGATTTAATTTCTATGTTTTGGCTCAAGGGTTTGGGAATTATAATGCTACCATAGCCGAACCACAGTTTAATTGTGTTGATCCACAAGTGCGTAACACAATTTCTGTACCTGTCGGAGGATGGGCTGTCATCAGATTCCAAGCAAATAATCCAGGAATTTGGCTTGTGCATTGCCATTTGGAAACTCATCTACCATGGGGGCTAGCCATGAGTTTTGAGGTTGAGAATGGACCTACCCCTTCAACAAGATTGCCTCCACCACCAGCTAATCTTCCTAAGTGCTAA 1731 0.4252 MTRFVFYLAWAFATIMLVASSLLASAAVVEHTWDVENFSVERLCNQHVITGVNGTLPGPGIEAQEGDTVIIHVNNKSPYNVTIHWHGIFQLASQWSDGPEYVTQCPIGPGGSYTYNFTITGQEGTLWWHAHSSFLRANIYGSLIIRPSKGRSYPFSQVHQEVPILLGEWWNDNVEDIGNNASKGIAPRNSDAYTINGLPGDFYNCSQNQTYRLNVEQGKRYLLRIINAALNEQHFFKIANHSFTVVAIDAGYTREYKTDVIVLAPGQTVDAIITTNQRVGSYYMAFSPYRSSNVRNDTAIARGVITYEGASSTSAPIMPNLPDAHDTPTAHKFYSNLTGLADGPHWIPVPRKVDENMFIAFGIALTVCNLPGPSACLNAFGVNSPFSASMNNESFVLPTGRGFSMLEAFYRNVSGVYTKDFPSQPPLVFNYTDPSLETNTSNPLIFAPKSTKAKTLKFNSTVQIVLQNTAILGTENHPIHVHGFNFYVLAQGFGNYNATIAEPQFNCVDPQVRNTISVPVGGWAVIRFQANNPGIWLVHCHLETHLPWGLAMSFEVENGPTPSTRLPPPPANLPKC 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02169 576 TIGRFAM laccase: laccase 27 576 IPR017761 GO:0046274|GO:0048046|GO:0052716
Aip02g02169 576 SUPERFAMILY Cupredoxins 346 576 IPR008972 -
Aip02g02169 576 ProSitePatterns Multicopper oxidases signature 2. 539 550 IPR002355 GO:0005507
Aip02g02169 576 SUPERFAMILY Cupredoxins 156 344 IPR008972 -
Aip02g02169 576 CDD CuRO_1_LCC_plant 31 147 IPR034288 GO:0005507
Aip02g02169 576 Pfam Multicopper oxidase 37 149 IPR011707 GO:0005507
Aip02g02169 576 CDD CuRO_3_LCC_plant 416 559 IPR034289 GO:0005507
Aip02g02169 576 Pfam Multicopper oxidase 421 558 IPR011706 GO:0005507|GO:0016491
Aip02g02169 576 Pfam Multicopper oxidase 161 310 IPR001117 -
Aip02g02169 576 CDD CuRO_2_LCC_plant 162 307 IPR034285 -
Aip02g02169 576 SUPERFAMILY Cupredoxins 23 172 IPR008972 -
Aip02g02169 576 PANTHER LACCASE-7 13 576 - -
Aip02g02169 576 PANTHER MULTI-COPPER OXIDASE 13 576 IPR045087 -
Aip02g02169 576 Gene3D - 157 342 IPR008972 -
Aip02g02169 576 Gene3D - 9 147 IPR008972 -
Aip02g02169 576 ProSitePatterns Multicopper oxidases signature 1. 534 554 IPR033138 -
Aip02g02169 576 Gene3D - 379 576 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02169 Aip-Chr2 91861548 91867369 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02169 K05909 - gmx:100812336 817.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g01863 04 83456546 83471908 Aip02g02169 02 91861548 91867369 PCT