Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02149 ATGACGTGCTTGGATGAGGAAATAATAGACCATTTCGAGAGTTCATTGTTTTCGCAAGATGAAGATGTGCGTGCCGACAATGATCCTTTGGCATGGGAGGACATTGAGGGTTGTCATGTTTCGGAAAATTATGCCGAAGAAGTGCAGGGTGTTGATTGTAATGTCGATGAATTTTTTGGTGACACCTTCTATGACAACTTGGATGAAAGAGCAGTTGACGGTATTAATGAGCTTAGGTATATGAATCTGAAAGAAATAACTGCAAGTGAGGTTAGGTTGTTACATTTTTGGGATCGGACGGTTTCATTTTCTTTCTACCAATTGTATTCAAAGATGAACGGTTTTGCTGTTAGAAAGAATAAGATTAGAAGGAATGTAAAAAACGAGGTAACACAACAACAATTTGTTTGCTTTAGGGAGGGGTTTAGAAATTCGGGGTCTGAGAATGATTCCCATCGACACAAACGCAAGCCGAAGCCTGAGACTAGATGCGGATGTCTGGCTGAAATGTGTGTTCATGTACATGTCGAAAGCGGTAGATGGATCACTTCGTACTTTCAGGATGAGCACAACCATGACATGCTTGATGATAGATTGACCTTTATGCTTCCCGGGCATAGGAACATGAATGATACCGCCATTGATCAAATGAATCTAATGCTAAAAGTTGGAATCAAAACACCTCAGATATATTCATCGTTTGTGCACATTGCGGGTGGATTCCAAAATGTACCCTTCCTGAAGAAAGATATATATAACCAGATAGTGAAGCAACGGAGGGTCATAGGAGGGGGATGCTATGTGTTGTCTGAAGTTCTTGGAGTCAATGGCTGGGGAAAACCTAGGAATGTTTGTTCGATACCTAGCTGA 870 0.4115 MTCLDEEIIDHFESSLFSQDEDVRADNDPLAWEDIEGCHVSENYAEEVQGVDCNVDEFFGDTFYDNLDERAVDGINELRYMNLKEITASEVRLLHFWDRTVSFSFYQLYSKMNGFAVRKNKIRRNVKNEVTQQQFVCFREGFRNSGSENDSHRHKRKPKPETRCGCLAEMCVHVHVESGRWITSYFQDEHNHDMLDDRLTFMLPGHRNMNDTAIDQMNLMLKVGIKTPQIYSSFVHIAGGFQNVPFLKKDIYNQIVKQRRVIGGGCYVLSEVLGVNGWGKPRNVCSIPS 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02149 289 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 88 222 - -
Aip02g02149 289 Pfam FAR1 DNA-binding domain 104 195 IPR004330 -
Aip02g02149 289 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 88 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02149 Aip-Chr2 91568484 91569820 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip02g02149 FAR1 5.5e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02149 - - adu:107464713 347.821