Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02123 ATGCGCAATCTGAGCCATCGAAATCTCATGAAGATCATAGGTTGTTGTTCAAGTATAGATTACAAGCTTTTAGTGATGGAGTTCATGCCTAATGGGAGCCTTGAGAGATGGTTGTATTCTCATAACCATTGTTTGGACTTCTTGCAAAGGCTAAATATAATGATAGATGTGGCATCTGCATTGGAGTATCTGCATCATGGATCTTCACCTATAGTGGTTCATTGTGATGTCAAACCTTGTAATGTCTTATTGGATGAAGACATGGTTGGCCATGTCAGTGGCTTTGGCATTGCCAAATTGCTTGGCGAGGGACAATCCAAAGAATATACCAAGACCATGGCTACAGTTGGCTACATTGCACTGGAGTTTGGATCCAAAGGGATTATCTCTACAAAGGGAGATGTATACAGTTTTGGGATAATGCTGATGGAAACATTCACAAGAAAGAAGCCAACAGATGACTTGTTTGTTGCAGGATTAAGCATGAAAGGTTGGATTAGTGAATCATTGTCACGTGCAATTGATCGAGTTGTGGATTCCAACTTGTTACAAGATGAAGGTCACCACCATGTTGATGACATAATAGCATCTACATCATCTATCTTGAAACTGGCCTTGAATTGTTGTGAGGATTTACCTGAAGAACGAATGAACATGACAGATATTGCTGCATCACTGAACAAAGTTAAGGCCAAGTTTCTTAAAGCTAGTGACAAGGATGTTGTTCGGTTTTGTAGAAAATGA 744 0.3978 MRNLSHRNLMKIIGCCSSIDYKLLVMEFMPNGSLERWLYSHNHCLDFLQRLNIMIDVASALEYLHHGSSPIVVHCDVKPCNVLLDEDMVGHVSGFGIAKLLGEGQSKEYTKTMATVGYIALEFGSKGIISTKGDVYSFGIMLMETFTRKKPTDDLFVAGLSMKGWISESLSRAIDRVVDSNLLQDEGHHHVDDIIASTSSILKLALNCCEDLPEERMNMTDIAASLNKVKAKFLKASDKDVVRFCRK 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02123 247 SUPERFAMILY Protein kinase-like (PK-like) 1 226 IPR011009 -
Aip02g02123 247 Pfam Protein tyrosine and serine/threonine kinase 1 225 IPR001245 GO:0004672|GO:0006468
Aip02g02123 247 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 1 235 - -
Aip02g02123 247 Gene3D Phosphorylase Kinase; domain 1 1 32 - -
Aip02g02123 247 ProSitePatterns Serine/Threonine protein kinases active-site signature. 72 84 IPR008271 GO:0004672|GO:0006468
Aip02g02123 247 Gene3D Transferase(Phosphotransferase) domain 1 33 244 - -
Aip02g02123 247 SMART serkin_6 1 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g02123 247 PANTHER RECEPTOR-LIKE PROTEIN 55 1 235 - -
Aip02g02123 247 ProSiteProfiles Protein kinase domain profile. 1 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g02123 247 PIRSF ILK 1 163 - -
Aip02g02123 247 PIRSF ILK 190 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02123 Aip-Chr2 90974499 90975562 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02123 1 237 Receptor kinase-like Gene Family AT3G47570 38.911 9.61e-54 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Aip02g02123 PK_Tyr_Ser-Thr 1e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02123 - K04733 aip:107647131 472.626