Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02115 ATGGGAGCTCGTTGCTCCAAATTCTCTTTTTGCTGGTTCCACTCGAACCTCAAACCATGTGTCCTTGAATCCCCCGACCAAGAGTTCAAGTTGGAGGAACTGAAGGGTGCAACAAACGGTTTCAGTTCGGAGAACATAGTGTCTGAGCATGGAGAGAAGGCTCCCAATGTGGTCTACAAAGGGAAGCTTCAAAATGGAAATTCCATCGCCATTAAACGCTTCAACAAGTTTGCTTGGCCCGATTCTCGCCAATTCCTTGAAGAAGCAAGGCAAGTGGGGAGCCTTAGAAGTGAACGTTTGGCGAATTTGATTGGTTATTGCTATGAAGGGGAAGAGAGGCTTCTAGTTGCTGAGTTCATGCCCCATGAAACACTTGCCAAACATCTCTTTCATTGGGAGAGAGAGCCAATGAAATGGGCAATGAGGTTGAGGGTGGCATTGTACTTAGCTCAAGGTCTAGAGTATTGCACAAGTAAAGGAAGGGGTTTGTATCATGATCTGAATGCCTATAGAATCTTGTTTGACCAGGATGGTAATCCTAGGTTGTCTTGCTTTGGCCTCATGAAGAACAGCAGAGATGGCAAGAGTTACAGCACTAATTTGGCTTTCACCCCTCCTGAGTATCTAAGGACTGGGAGAGTGACCCCAGAGAGTGTGGTTTATAGTTTTGGAACATTGTTGCTTGATCTCTTGAGTGGTAAACATATTCCCCCAAGCCATGCACTTGACCTTATTCGGGGGAAGAATTTCTTGATGTTGATGGATTCAGCGTTGGAGGGTCATTTCTCAAAAGATGATGGAACAGAGTTGGTTCGTTTGGCTTCTCGTTGTTTGCAGTATGAACCTCGTGAGAGGCCAAATGCTAAGTCTCTTGTTGCTTCTCTCATCTCACTTCACAAACAATCAGAGGTTCCCTCATATGTTCTGATGGGTCTGAAGCATGAAACTACATTATCCTCAACAAAGCAATTGGCATTGACACCTTTTGGGGAAGCTTGTTTAAGAGTGGACCTTACTGCCATACATGAAATATTAGAGAAGATTGGTTACAAAGATGATGAAGGAATTGCCAATGAGCTTTCATTTCAATTATGGACCAGTCAAATGCAGGAGACCTTGAATTTGAAGAAGCATGGAGATACTGCTTTTCGAGCAAAGGACTTTGCCACTGCCATTAATTGCTATACTCAATTCATAGATGGAGGAACAATGGTATCACCAACAGTGTATGCAAGGAGGTGCTTATCATATTTGATGAAAGAGAAAGGAGAAGAAGCATTAGGAGATGCAATGCAAGCCCAAACAGTGTCTCCTCAATGGCTCACTGCTTTCTATCTTCAAGCAGCTTGTCTCTTCACCCTTGGAATGGATCATGATGCTCAACAAACTCTCAACCATGCCACTAACATGGAACCCAAAACAAACAAAATTTGA 1434 0.4351 MGARCSKFSFCWFHSNLKPCVLESPDQEFKLEELKGATNGFSSENIVSEHGEKAPNVVYKGKLQNGNSIAIKRFNKFAWPDSRQFLEEARQVGSLRSERLANLIGYCYEGEERLLVAEFMPHETLAKHLFHWEREPMKWAMRLRVALYLAQGLEYCTSKGRGLYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSALEGHFSKDDGTELVRLASRCLQYEPRERPNAKSLVASLISLHKQSEVPSYVLMGLKHETTLSSTKQLALTPFGEACLRVDLTAIHEILEKIGYKDDEGIANELSFQLWTSQMQETLNLKKHGDTAFRAKDFATAINCYTQFIDGGTMVSPTVYARRCLSYLMKEKGEEALGDAMQAQTVSPQWLTAFYLQAACLFTLGMDHDAQQTLNHATNMEPKTNKI 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02115 477 Gene3D Phosphorylase Kinase; domain 1 20 119 - -
Aip02g02115 477 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 476 IPR045845 GO:0004672|GO:0009742
Aip02g02115 477 SUPERFAMILY TPR-like 373 475 IPR011990 GO:0005515
Aip02g02115 477 ProSiteProfiles Protein kinase domain profile. 44 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g02115 477 Pfam Protein tyrosine and serine/threonine kinase 57 295 IPR001245 GO:0004672|GO:0006468
Aip02g02115 477 Gene3D Transferase(Phosphotransferase) domain 1 121 312 - -
Aip02g02115 477 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 476 - -
Aip02g02115 477 SUPERFAMILY Protein kinase-like (PK-like) 27 303 IPR011009 -
Aip02g02115 477 Gene3D Tetratricopeptide repeat domain 369 477 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02115 Aip-Chr2 90760902 90765950 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02115 27 295 Glycoside Hydrolase AT3G07070 35.017 1.86e-41 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Aip02g02115 PK_Tyr_Ser-Thr 5.8e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02115 - - gmx:100814477 858.596
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g02115 02 90760902 90765950 Aip02g02115 02 90760902 90765950 ECH