Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02079 ATGGTGTTCACTCGTACATGTGATTCAACTCGTCTTCTTGCTTTGATTCTTAGTAATCTTGGTCTAAAAGCCATCCCAATTAATGGTCATATGACCCAGTCAAAAAGGCTTGGAGCCTTGAATTTATTCAAGTCTGGGGCTCGCAATATTCTCATTTGTACTGATGTAGCTAGTAGAGGATTGGATATTCCAATAGTAGATGTTGTGATTAACTATGACATCCCCACAAACTCCAAAACTAAACCTAAATTGCTGGATTCCTTATCTTGTGCTCTAAGGACTGCTCGTGCAGGGCGTTCTGGGGTTGCAATTTCCCTTGTGAACCAATATGAGCTGGAGTGGTACATTCAAATAGAGAAACTTATAGGCAAGAAGCTACCAGAATATCCTGCACAAGAAGAGGAACGAGGCCAAACGATTATCAGTAATGAAAATGAAGGAGGAAGCCATGGGGAAGAAGAAACGGAGAGGTGA 474 0.4156 MVFTRTCDSTRLLALILSNLGLKAIPINGHMTQSKRLGALNLFKSGARNILICTDVASRGLDIPIVDVVINYDIPTNSKTKPKLLDSLSCALRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPEYPAQEEERGQTIISNENEGGSHGEEETER 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02079 157 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 137 IPR001650 -
Aip02g02079 157 PANTHER RNA HELICASE 1 135 - -
Aip02g02079 157 Gene3D - 1 155 IPR027417 -
Aip02g02079 157 MobiDBLite consensus disorder prediction 133 157 - -
Aip02g02079 157 SMART helicmild6 11 101 IPR001650 -
Aip02g02079 157 PANTHER BNAC02G41920D PROTEIN 1 135 - -
Aip02g02079 157 Pfam Helicase conserved C-terminal domain 1 100 IPR001650 -
Aip02g02079 157 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 133 IPR027417 -
Aip02g02079 157 CDD SF2_C_DEAD 1 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02079 Aip-Chr2 89478588 89480948 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02079 1 130 Eukaryotic Initiation Factors Gene Family AT3G19760 30.769 9.73e-15 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02079 K14777 - aip:107627557 240.35