Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02075 ATGGCTGAGGAGGGTTTTGAGGGTTACCATGTCCCACAACAAAGCAGAAGAGATAAGCTTAGAGTAGTTGTGGCTCACAACCAACAACACCACCATCAACAAACAACAACACTACTAGAATCTTCTTCCACTCCTCCTACTACTACTACTTCTACTTCTTGGTACGACCCTTCTTCATTCATTCCCTCCGATTTATTAACCTGTGCAGCAGCAACACAACAAGTAACCGCCATCAACAACGGTTCTTCTTCTTCATCTTCTTCTCCTTCTTCTAACTCCTCTTCCGTTTCCCTTTCCCATCACCATGCTTACATGGATCCACAATCTTCTTCTACTTTGCATTTGAATAACCCGTCAATTCACGTTTTTGGAAACAACAACAACAACAACAACAACAATAATCCGTTGTTTCTCTACCAGCCACAGAATCTCAGAGATTTCGATAACCATGGCGGTTACGGTGGTGGTGGTGGCAGCGGCGGAGGCGGTGAAATCATGGTGTTCAAGCCTGAACCATTATCTCTATCTCTCTCTTCCCACAACCATAACCATGGTAGTAACAATAACAATCATAACAGCAACAATAACGGCAATAATCTTCCTCTAGAACTGAATCTTCAGCGGTATGGGGCTATGATTTGCGGTGGTGGTGGTGGTGTGATTCCGGGGTTGGTGGTTAACAGTAGTGGTGGGGGTTCTGGTACTTCGAACGAAGTTTCTAGAAGCTGTTCGTCGGTAATGGTGGTACCACAAATGATGGGTCCATTTACGGGTTACGCTTCGGTGTTGAAGGGATCGAGGTTCTTGAAACCAGCACAGCAATTGTTAGAGGAGTTATGTGATGTTGGTGTTGGTGTTGTTGGTGCTGAAGATAAGATCATTGTTGCTGATGCTTCGTTAATGGAACCTCCTCCTACTGCTGCTAGTACTACTACGCCATTAATGGAGTGCTTGAATCATTCTCATCATGAAGATCCTCTATTGCTTGCAGATCAGCATGCTGCTGCTGCTGTTGAGAGTCGCAAGAAGTCAAGGCTCTTAACCATGCTTGATGAGGTTTATAGGAGGTACAGGCAATATTATCAGCAGATGCATGCAGTGGTAACATCGTTCGAGTATGTTTCGGGCCTCACGAATGCAGCTCCATATGCGAGTTTGGCCATAAAGACAATGTCCAAACACTTTAGATGTCTTAAGAATGCAATTACTGACCAGCTTCAGTTCAACAATAAGACTCATTTTCAACTAAGCAACAGGAAAGACGAGTCTCCGAGATTCGGCAACAATGATCGTGGCCCTTACGGCCAAAGGTCAGGATTCATTGAGCACCAACCTGTTTGGAGACCTCAAAGAGGACTCCCTGAGCGCGCCGTGACGGTTCTCAGGGCGTGGTTATTCGAGCACTTTCTGCACCCTTACCCGACCGATACGGACAAATTAATGTTGGCTAAACAAACTGGTTTATCTCGTAGCCAGGTGTCTAACTGGTTTATTAATGCAAGAGTAAGGCTGTGGAAACCAATGGTGGAAGAAATACACATGCTAGAAACCCGGCAAGCTCAGAAAAATACTCAAAGAGAAGAGCATAGTAGGAACAAGTCGAGCGATCCCTTGCCTTCGGATAACACAACGCTTGTTTCAGATAATCCATCGACCTCGGCCGCCGATAAATTTCAGGAGGCACCTTACAAGCGAGCTATGAACGAGCTTCCGAGCATGGCGATTAGGACTCAAGAACAAGTGAATCTTGCATGCCACGGCAACCAGCAAGTTGGCATTGGAGTGAGCATGGGGAGTGCTAGCAATAATGTGTCACTTACACTAGGCCTTCACCAAAATCATGGGATTGGTTTGGCCGAACCGTTTCCATTGAGCGCGGCTCAGCGCTTCGGCCTTGGTCTCGAAACCAATAATGAAGGCTATGTCCTGAGCGGTTTTGAATCGCAAAACCGGCATTTCGGAAGGGATGTTATTGGAGGGCAACTATTGCATGACTTTGTAGGATGA 2007 0.4599 MAEEGFEGYHVPQQSRRDKLRVVVAHNQQHHHQQTTTLLESSSTPPTTTTSTSWYDPSSFIPSDLLTCAAATQQVTAINNGSSSSSSSPSSNSSSVSLSHHHAYMDPQSSSTLHLNNPSIHVFGNNNNNNNNNNPLFLYQPQNLRDFDNHGGYGGGGGSGGGGEIMVFKPEPLSLSLSSHNHNHGSNNNNHNSNNNGNNLPLELNLQRYGAMICGGGGGVIPGLVVNSSGGGSGTSNEVSRSCSSVMVVPQMMGPFTGYASVLKGSRFLKPAQQLLEELCDVGVGVVGAEDKIIVADASLMEPPPTAASTTTPLMECLNHSHHEDPLLLADQHAAAAVESRKKSRLLTMLDEVYRRYRQYYQQMHAVVTSFEYVSGLTNAAPYASLAIKTMSKHFRCLKNAITDQLQFNNKTHFQLSNRKDESPRFGNNDRGPYGQRSGFIEHQPVWRPQRGLPERAVTVLRAWLFEHFLHPYPTDTDKLMLAKQTGLSRSQVSNWFINARVRLWKPMVEEIHMLETRQAQKNTQREEHSRNKSSDPLPSDNTTLVSDNPSTSAADKFQEAPYKRAMNELPSMAIRTQEQVNLACHGNQQVGIGVSMGSASNNVSLTLGLHQNHGIGLAEPFPLSAAQRFGLGLETNNEGYVLSGFESQNRHFGRDVIGGQLLHDFVG 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02075 668 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 69 642 - -
Aip02g02075 668 Pfam Associated with HOX 262 403 IPR006563 -
Aip02g02075 668 ProSiteProfiles 'Homeobox' domain profile. 444 507 IPR001356 GO:0003677
Aip02g02075 668 MobiDBLite consensus disorder prediction 536 556 - -
Aip02g02075 668 SMART prehox3 257 404 IPR006563 -
Aip02g02075 668 Gene3D - 450 512 - -
Aip02g02075 668 SMART HOX_1 447 511 IPR001356 GO:0003677
Aip02g02075 668 SUPERFAMILY Homeodomain-like 449 514 IPR009057 -
Aip02g02075 668 MobiDBLite consensus disorder prediction 518 535 - -
Aip02g02075 668 MobiDBLite consensus disorder prediction 79 140 - -
Aip02g02075 668 MobiDBLite consensus disorder prediction 417 441 - -
Aip02g02075 668 MobiDBLite consensus disorder prediction 27 56 - -
Aip02g02075 668 MobiDBLite consensus disorder prediction 175 199 - -
Aip02g02075 668 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 69 642 - -
Aip02g02075 668 MobiDBLite consensus disorder prediction 79 143 - -
Aip02g02075 668 Pfam Homeobox KN domain 464 503 IPR008422 GO:0003677|GO:0006355
Aip02g02075 668 MobiDBLite consensus disorder prediction 25 56 - -
Aip02g02075 668 CDD homeodomain 447 508 IPR001356 GO:0003677
Aip02g02075 668 MobiDBLite consensus disorder prediction 518 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02075 Aip-Chr2 89305154 89310588 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02075 163 668 Homeobox Transcription Factor Family AT5G02030 46.617 4.44e-123 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Aip02g02075 POX 2.4e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02075 - - ahf:112727818 1122.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g02075 02 89305154 89310588 Aip02g02075 02 89305154 89310588 ECH