Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02055 ATGCAAGCAAAGAAAAAATTTTCTTTAGGATACAATAATAATCTTATCACCACCAACAATAACGATCGTTCTTCCTATGACGAATCGTCATGGGAAGAACAAGCCTTTGCCGAAGACGCGGCCGGTGCCCTTGTTGGTGGATGCATATGGCCGCCAAGATCATATTCTTGCAGCTTTTGTAGGAGAGAGTTTAGGTCAGCTCAGGCTCTTGGTGGCCACATGAATGTTCATAGAAGGGATAGAGCAAGGCTTAAGCAACAACAACCCTCTAGTCCCAACAACAAGAATAGTAATAGTAATAATAATGATGAAGTTTTTCATAGCACACCTTTGGGATCATCATATAATACCCTATTATACCCCTCTACTACTTCTTCTACTACTCTTTGTGGATTAGCTTTTAAAACTAACCCTAATTCTGATCTTGTTATTCCTTCAGCTTCTTCTTCGTCACTACCCTCTACTCCCTCTTCTTCCAAGGCTTTGTTATTAGCTCCTCCATCATTATTTCCACCACTTTGCAATAATTCTTCTTCTATTCTTCTTCACAAGAATTCCCAAGTCTATTGTTCTCATCCATGGTCAAACTTTGGTGGAGATAATCAAAGGTTGTGTTCTAATAATAAGTTCTTCAACCCTGAAGAAGCTGATGTTGAGAAAGTCTCACAAGGTAAGGGAAAAAATGATGAAGGAGAAGAAGAAGAAGACGGCGATGACGACGACCATGTGGGTGTGAGCTTGAACTTGGTTGTTTGTAGAAGTCATCATCAATTTGAGGCTAAAGAAGAAGAACATATAAGTTTCAAGAGGAGGAAAACAGAAGCTTCATCAATTCCACCATTTTTACCAAACTCAACAAGCTCAGTTGATAGACATAATCATCATCACATGCATCATCCGAAGATGATTGAATTAAACCCTAGCTCCATTGAAGAGCTAGATCTGGAGTTAAGGCTTGGTAGCTGCAGCTCCGAGGTATAG 981 0.3986 MQAKKKFSLGYNNNLITTNNNDRSSYDESSWEEQAFAEDAAGALVGGCIWPPRSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQQQPSSPNNKNSNSNNNDEVFHSTPLGSSYNTLLYPSTTSSTTLCGLAFKTNPNSDLVIPSASSSSLPSTPSSSKALLLAPPSLFPPLCNNSSSILLHKNSQVYCSHPWSNFGGDNQRLCSNNKFFNPEEADVEKVSQGKGKNDEGEEEEDGDDDDHVGVSLNLVVCRSHHQFEAKEEEHISFKRRKTEASSIPPFLPNSTSSVDRHNHHHMHHPKMIELNPSSIEELDLELRLGSCSSEV 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02055 326 MobiDBLite consensus disorder prediction 215 230 - -
Aip02g02055 326 ProSitePatterns Zinc finger C2H2 type domain signature. 57 77 IPR013087 -
Aip02g02055 326 ProSiteProfiles Zinc finger C2H2 type domain profile. 55 82 IPR013087 -
Aip02g02055 326 MobiDBLite consensus disorder prediction 215 242 - -
Aip02g02055 326 SUPERFAMILY beta-beta-alpha zinc fingers 52 81 IPR036236 -
Aip02g02055 326 SMART c2h2final6 55 77 IPR013087 -
Aip02g02055 326 Pfam C2H2-type zinc finger 55 79 - -
Aip02g02055 326 MobiDBLite consensus disorder prediction 86 107 - -
Aip02g02055 326 MobiDBLite consensus disorder prediction 71 107 - -
Aip02g02055 326 Gene3D Classic Zinc Finger 52 109 - -
Aip02g02055 326 PANTHER OS07G0101800 PROTEIN 10 323 - -
Aip02g02055 326 MobiDBLite consensus disorder prediction 277 296 - -
Aip02g02055 326 PANTHER C2H2 AND C2HC ZINC FINGER PROTEIN 10 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02055 Aip-Chr2 88580004 88580984 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02055 23 180 C2H2 Transcription Factor Family AT2G37740 43.373 2.01e-28 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02055 - - adu:107475041 525.013