Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02045 ATGGATTCTGGGGTTATATTCTTATCGCTGCGGCGTCGCAAGTTACCGTCGCTAGAGGCCTTCCTGATGCCGGTAGACCTTTCTGACGCGGCGCTCATCCGGACCGTCGTCGCTGTCGTCGGCGACCTCGTCACGGGCTTCTCCGATCATCGGTTCCCCTTCCAGCGCAAGAACTCTCACTCCCTAATCCGAAAGATCGAGGTTTTTCAGCTCCTATTAGAGTCACTGAGGGATTCAAGAGTGCGCGCTCTACTTGAGGGAGCTCTATTTGCTGTTATATCGTTCCAACAGATTCTCCTTGATTACTGCGCACAATTGAGCAAGGCCGTTGACCTTAGCAACAATGTTAGAGAACAGATTGAGTTGTTGAGGAGACAGTCTAGGAGGGCCAGATTGTTTGTGGATGAGAAGGATGATGTCGTTAGGATAAAGTTCTTTTCTTTTCTCGAGGCATTTGAGAATGAGAGGATTCCTTGTTCTGATGAATTGAGGCGTTTTTATGTTGATGAGTTGAAGAGTAGTGATGCTAGGAACTGTGTGGCTGAAACTGAAGTTTTGGAAGAGCAGATTGTTGATCATGAGGGTGAAATTGGACCAACCATTTCTGTGCTTAATTAA 618 0.4725 MDSGVIFLSLRRRKLPSLEAFLMPVDLSDAALIRTVVAVVGDLVTGFSDHRFPFQRKNSHSLIRKIEVFQLLLESLRDSRVRALLEGALFAVISFQQILLDYCAQLSKAVDLSNNVREQIELLRRQSRRARLFVDEKDDVVRIKFFSFLEAFENERIPCSDELRRFYVDELKSSDARNCVAETEVLEEQIVDHEGEIGPTISVLN 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02045 205 PANTHER U BOX DOMAIN-CONTAINING 11 109 - -
Aip02g02045 205 PANTHER U BOX DOMAIN-CONTAINING 108 199 - -
Aip02g02045 205 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 17 11 109 - -
Aip02g02045 205 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 17 108 199 - -
Aip02g02045 205 Coils Coil 106 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02045 Aip-Chr2 88163931 88164627 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02045 1 205 U-box Gene Family AT1G29340 42.412 4.59e-48 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02045 - - gmx:100783749 217.624