Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02044 ATGGTAACAATCTTAGGTACTCATACAGTGATCCCAAAAGAAGAAACTCCAAAGGGTCTTCTATGGCTATCAGACAACGACCAACTTTGGCGATGGAGTCATACACCTTCAATCTACGTTTACAACCCAAAACAGAACAACGCCAAGAACAACAACACTGTCGTCGATGTCAATGTCCTTGTTGAGCGAATGCGAGAGTCTCTCAGCGAGATTCTCGTTCACTACTATCCATTAGCCGGGAGGCTGAGTTGGACGGACGGTGGCCGTTTGGAACTCGATTGCAACGCAAAGGGGGTATTGCTTCTCGAAGCTGAATCGAAGAAATCAATGGCGGAATATGGAGACTTCACTCCAAATGAACCCAGCATCAAAGAACTCATCCCAGCTGTTGACTACTCTTGTCAAATAAACGAGCTTCCTTTGTTCTTGGCACAGGTGACAAAGTTCCACGGCGGCGATGGCGGCTTTGCAGTCGGAATCCTTTTTTCTCATCCATTAGGCGATGGCCTCGCCGCCATTCGCTTCATCAACTCATGGGCGAAGCTCACTCGAGGTGCGAAGCTAGATCCAAGCGAGCTTCCGTTTCTCGACCGAACCGTGCTCAAACCAACTGGGCCATTAACTCCACCCCTGTTCGACCACCGGGAGTTCAAGCCTCTGCCGCTCATCCTCGGAAGAACCGACAACATCGAAGAGCAAAAGAAGAAGACGACCTTCGCGCTGTTAAAACTCACACCAGAACACGTCCAGAAGCTCAAAAAGAATGCAAATGCAAATGTAACAGCAAATGGAAACGGTAACGCTCCTCATAACCCATCTCCGAGACCGTACAGCAGATTCGAAATTATCAGCGCACATATATGGAGATGCGCTTGCAAAGCTCGTAATCTTGAAGAGAATCAACCAACGGTCGTTAAATTCAACGTCGATATTCGCAACAGATTGAATCCGCCACTTCCTCAAAACTACTTCGGAAACGCGTTGGGTCCGACGGTTACGCCAACTTGCTACGCTAAAGAAATCACCACTCAACCAATCAGTTACGCATCGCAGAAAATAAGGGAAGCTGTTAATAAAGTGTCGAATCACGAGTTTGTTAAATCACAAATGCATTACGTGGCAGGGTTTGAAAACCGTTGGGATCTGATTAGGACACCTTATTTGGAGAAAGGTGAGTATAGAGCTGATGTGCCTTTCTTTGGGAATCCTAACATTATACTTGGCAGTTGGATGAGCATGCCGTTTTATGAGGCTGATTTTGGGTTGGGGAAGCCGTTTTATTTTGGTCCTGGTGGTGTGTGTCCTTATGATAGAGGGGTTATTGCTCTAATGCCTGACGAAGATGGTGATAATGGATATGGTGTTGTGGTGTACATGCACTTTCAGGTAGACCACATGAAAGATTTCATCAAATACTTTTGGGAAGATATTTGA 1434 0.463 MVTILGTHTVIPKEETPKGLLWLSDNDQLWRWSHTPSIYVYNPKQNNAKNNNTVVDVNVLVERMRESLSEILVHYYPLAGRLSWTDGGRLELDCNAKGVLLLEAESKKSMAEYGDFTPNEPSIKELIPAVDYSCQINELPLFLAQVTKFHGGDGGFAVGILFSHPLGDGLAAIRFINSWAKLTRGAKLDPSELPFLDRTVLKPTGPLTPPLFDHREFKPLPLILGRTDNIEEQKKKTTFALLKLTPEHVQKLKKNANANVTANGNGNAPHNPSPRPYSRFEIISAHIWRCACKARNLEENQPTVVKFNVDIRNRLNPPLPQNYFGNALGPTVTPTCYAKEITTQPISYASQKIREAVNKVSNHEFVKSQMHYVAGFENRWDLIRTPYLEKGEYRADVPFFGNPNIILGSWMSMPFYEADFGLGKPFYFGPGGVCPYDRGVIALMPDEDGDNGYGVVVYMHFQVDHMKDFIKYFWEDI 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02044 477 Gene3D - 1 219 IPR023213 -
Aip02g02044 477 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 5 477 - -
Aip02g02044 477 Pfam Transferase family 1 471 - -
Aip02g02044 477 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 5 477 - -
Aip02g02044 477 Gene3D - 226 476 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02044 Aip-Chr2 88140153 88141955 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02044 2 475 Monolignol Biosynthesis Gene Families AT5G48930 34.599 3.09e-82 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02044 K13065 - gmx:100779814 490.73