Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02041 ATGAGGGAGTTTGGAAATGAGAAAGGTCTTCAACCCCAAATAAATCTCCAGGGATACATACTAGGAAACCCCGTAACGACAAGTGAAGAAGGAAATGATCATATCCAATATGCTCATGGAATGGCACTTATTTCTGATGAACTCTATTTGTCATTGAAGAGAAATTGTAAAGGAGATTATCTAAATATAAATCCCGAAAATACATTGTGTTTAAGCGACATGGAGTATTACAATAAGGTAAGTAATGATCATCTCAATTTTACTATATATGGTAATGATATCCACTGTAATTTGATGAGAATATTTTTGGACTTTATAAAATTTCATCAGTTCTTGCCAAATTGTTCANCAATAATGCACCAATATCATATTCTACAGGGGACTATAGGGGAATGGGTACGTTGTTATAAAGATGATTATGAATTCAGCATCGTTAACAGTGTTCCCTTCCATGCAAATCTCAGTGCAAAAGGGTACCGTTCTTTAATTTTCAGTGGAGATCATGATGCAGTGGTTCCTTTTTTCTCAACTCAAGCATGGATAAGGTCTCTAAACTATTCCATTGTAGATGATTGGAGGCCATGGTATTTAAATGACCAAGTTGCAGGATACACCAGGACTTACTCAAATAAAATGACATTTGCAACTGTAAAGGGTGCAGGACATACAGCTGCTGAATTGAAGCCTAATGAAAGTTATGTCATGTTCACTAGATGGATATCTAATAGGCCTTTGTAA 738 0.355 MREFGNEKGLQPQINLQGYILGNPVTTSEEGNDHIQYAHGMALISDELYLSLKRNCKGDYLNINPENTLCLSDMEYYNKVSNDHLNFTIYGNDIHCNLMRIFLDFIKFHQFLPNCSXIMHQYHILQGTIGEWVRCYKDDYEFSIVNSVPFHANLSAKGYRSLIFSGDHDAVVPFFSTQAWIRSLNYSIVDDWRPWYLNDQVAGYTRTYSNKMTFATVKGAGHTAAELKPNESYVMFTRWISNRPL 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02041 245 Pfam Serine carboxypeptidase 6 242 IPR001563 GO:0004185|GO:0006508
Aip02g02041 245 Gene3D alpha/beta hydrolase 4 245 IPR029058 -
Aip02g02041 245 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 116 242 IPR001563 GO:0004185|GO:0006508
Aip02g02041 245 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 10 92 IPR001563 GO:0004185|GO:0006508
Aip02g02041 245 PANTHER PEPTIDASE S10, SERINE CARBOXYPEPTIDASE, ALPHA/BETA HYDROLASE-RELATED 116 242 - -
Aip02g02041 245 PANTHER PEPTIDASE S10, SERINE CARBOXYPEPTIDASE, ALPHA/BETA HYDROLASE-RELATED 10 92 - -
Aip02g02041 245 SUPERFAMILY alpha/beta-Hydrolases 12 245 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02041 Aip-Chr2 88109762 88114846 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02041 105 245 Calmodulin-binding Proteins AT2G22960 55.634 7.65e-56 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02041 K16296 - gmx:100780069 301.597