Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02040 ATGGCTTCCAATTCCAAAAAATGGAGTTACTTTTTTCAATTACTGCTTCTCTCTCTCACACTTTTCTTGCAGATAGCATCTCATAAAATTGAAGCAGGTGGTTCAAAAGTTGAATACCTTCCTGGTTTTGATGGTCCTCTCCCCTTTCAACTTGAAACTGGGTATGTGGGATTGGGAGATTCAGAAGATGACATGCAAGTTTTCTACTATTTTGTTAAGTCAGAAAATGATCCTAAAAATGACCCTCTTTTGCTTTGGTTAACTGGTGGACCTGGCTGTTCTTCAATTTCAGGCTTTGTCTTCCAAATAGGTCCAGTGCAATTTAAAGTTGAGGAATTTGATGGGAGCTTGCCTAAGCTAATCTACAGGGCATCGTCATGGACAAAGGTAGCTAATGTTATCTTTGTAGATTTACCGATGGGAACAGGGTTCTCTTACGCAAAAGATGTCCTTTCTCAACGAAGTGATTGGAAACTTGTTCATCATGCCCACCAATTTATTAGAAAGATGGTATACCCATCAGCTCGGATTTGGCTTACCCACGAGTTAAATGGAGACTAA 561 0.3975 MASNSKKWSYFFQLLLLSLTLFLQIASHKIEAGGSKVEYLPGFDGPLPFQLETGYVGLGDSEDDMQVFYYFVKSENDPKNDPLLLWLTGGPGCSSISGFVFQIGPVQFKVEEFDGSLPKLIYRASSWTKVANVIFVDLPMGTGFSYAKDVLSQRSDWKLVHHAHQFIRKMVYPSARIWLTHELNGD 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02040 186 PANTHER PEPTIDASE S10, SERINE CARBOXYPEPTIDASE, ALPHA/BETA HYDROLASE-RELATED 14 171 - -
Aip02g02040 186 SUPERFAMILY alpha/beta-Hydrolases 37 170 IPR029058 -
Aip02g02040 186 Gene3D alpha/beta hydrolase 31 174 IPR029058 -
Aip02g02040 186 Pfam Serine carboxypeptidase 41 168 IPR001563 GO:0004185|GO:0006508
Aip02g02040 186 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 14 171 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02040 Aip-Chr2 88105186 88109722 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02040 28 59 Calmodulin-binding Proteins AT2G22960 62.500 3.79e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02040 K16296 - adu:107474956 246.128