Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01973 ATGTATCAATTTCTTGTGCAACGTTCAAGGCCTTTTCTTTCACAAAGATTTTTCTCTCAGTTTTCTTGGGCATCATCGTCATTATCACCACCTCTCACTAACAACATGTCCACCACTTCTGGTCTCGTCATTCCCTGCAAAGCTGCTGTTGCATGGGAAGCAGGGAAACCACTGGTGATAGAAAAAGTGGAGGTGGCTCCGCCACAGGCCATGGAAGTGAGGATCAAGGTTAAATATACCTCACTCTGCCATACTGATCTCTACTTCTGGGAGGCCAAGGGACAAACTCCACTGTTTCCCCGAATTTTCGGCCACGAGGCTGCTGGAATTGTGGAGAGTGTTGGAGAAGGAGTCACAGACTTGCATGTTGGGGATCATGTGCTTCCAGTATTCACCGGTGAATGTGGTGAATGCGCTCATTGCAAATCCGAGGAAAGCAACATGTGTGACCTCCTGAGAATAGATACAGAGAGAGGAGTCATGCATAGTGATGGTAAAAGCAGGTTTTCCATTAATGGTACGCCAATAAACCACTTTGTTGGCACGTCCACATTTAGTGAATACACTGTGATACATTCTGGATGCTTGGCAAAGCTCAATCCACTGGCACCAATGGATAAAGTATGTGTCCTCAGTTGTGGTATCTCAACAGGATTGGGAGCAACTTTGAATGTAGCAAAACCAAAGAAGGGTTCTACAGTGGCAGTGTTTGGTCTTGGAGCTGTTGGACTTGCTGCTGCTGAGGGTGCCCGAATTGCTGGTGCATCTAGAATTATTGGAATTGATTTGAACCCAAACAGGTTTGAAGAAGCAAAAAAATTTGGAATAACCGATTTTGTGAATCCACAGGACTATGATAGGCCAGTTCAACAGGTGATTGCGGAAATGACCAATGGAGGAGTCGACCGAAGTATAGAGTGCACTGGAAACATTAACGCAATGATATCTGCTTTTGAATGTGTTCATGACGGATGGGGTGTTGCTGTGCTTGTTGGAGTTCCAACTAAGGATGCAGTTTTCATGACCAAGCCCATTAATTTGCTCAACGAAAGAACACTAAAAGGAACTTTCTTTGGAAATTACAAGCCCAGAACTGATCTTCCATCTGTGGTCGATATGTATATGAACAAGAAATTGGAATTGGACAAGTTTATAACCCACAGAGTTCCTTTCTCTGAAATCAACAAGGCATTTGATCTAATGTTGAGAGGGGAGGGACTAAGGTGTATCATTAGTATGGAAGACTAA 1248 0.4391 MYQFLVQRSRPFLSQRFFSQFSWASSSLSPPLTNNMSTTSGLVIPCKAAVAWEAGKPLVIEKVEVAPPQAMEVRIKVKYTSLCHTDLYFWEAKGQTPLFPRIFGHEAAGIVESVGEGVTDLHVGDHVLPVFTGECGECAHCKSEESNMCDLLRIDTERGVMHSDGKSRFSINGTPINHFVGTSTFSEYTVIHSGCLAKLNPLAPMDKVCVLSCGISTGLGATLNVAKPKKGSTVAVFGLGAVGLAAAEGARIAGASRIIGIDLNPNRFEEAKKFGITDFVNPQDYDRPVQQVIAEMTNGGVDRSIECTGNINAMISAFECVHDGWGVAVLVGVPTKDAVFMTKPINLLNERTLKGTFFGNYKPRTDLPSVVDMYMNKKLELDKFITHRVPFSEINKAFDLMLRGEGLRCIISMED 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01973 415 Pfam Zinc-binding dehydrogenase 241 371 IPR013149 -
Aip02g01973 415 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 104 118 IPR002328 GO:0008270|GO:0016491
Aip02g01973 415 Gene3D - 54 405 - -
Aip02g01973 415 PANTHER ALCOHOL DEHYDROGENASE 1-LIKE 38 413 - -
Aip02g01973 415 SUPERFAMILY GroES-like 363 411 IPR011032 -
Aip02g01973 415 CDD alcohol_DH_plants 44 411 - -
Aip02g01973 415 Gene3D - 218 356 - -
Aip02g01973 415 Pfam Alcohol dehydrogenase GroES-like domain 72 196 IPR013154 -
Aip02g01973 415 PANTHER ALCOHOL DEHYDROGENASE 38 413 - -
Aip02g01973 415 SUPERFAMILY GroES-like 39 221 IPR011032 -
Aip02g01973 415 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 204 378 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01973 Aip-Chr2 85219358 85224048 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01973 72 405 Monolignol Biosynthesis Gene Families AT1G72680 22.714 7.77e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01973 K18857 - egr:104426870 687.952