Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01970 ATGGAAACGCACAAAGCCAAACTACGCTGCCAATGGTTACAATGCAGACCACGTTCTTCATCCAGCGGCAAGAACAAACTGAAAGAACCTCTCGTGGATTCTGATGATTCTTCCAATGAGGTGCCGTTCTCAAGCAAGAGGAAGGCAGCAACCGCTTTTGGTTACTGTCACGGAATGAGAGAAGGGGCTAACGAGGAGGAGAAGAGGATGATGAATATCAAGAAAACAAAAATAGACTGTTTTATTCAAAATAAACAGTTTGATTTCAATGATGATGAACTTGAAGTTGTTGATATTCTCTTTAACCTCCCCGGGAACTTCTTAGAGAGAGTTAATTTAAAGACTTCAAGCAGTGCTGCGAATTCAACTGCCAGTGCTGACCAAGAACAGGTTTCAAAGGAGGATTCCAAGATGACCGTTAGCTCAATGGATTCTCATTCCAAGAAAGAAACAAAGAAACCAGTCAACACAGAAAGAAACAGCCCCAGTGCCGTGAATTCAGGTCCCAGTGCCTATCAAGAACGGGTTTCAAACAAGAATTCCAAGAAGGTCATTAGCTCAGTGGATTCTCGGTCCAAGAAAGAATCAAAGAAACCAATTAACCAAGAACCCTCTGAATTGCCACAAAATTTCAAGAACCTGATCAGTGATATGGGTGGCAGCAGGATCACTCTGCTTATCCAGAAAACTCTCTATCAATCGGATTTGGATCCGCAACAAAATCGGCTTTCGATTCCGTCACAGCAGGTCAAGGACAAAGATTTCTTGCTTCCTACGGAACTAGAAAGTTTGGAGGAGAAAAACGGAATAAAAGTGAAATTGATCCAACCTTCCCTGGAAATCACCGAGTTGACTTTGATTAAGTGGTTCATGCACAAGGGCCCAGGGTCAAAGAAAGTAAGCATTTCCTATATTTTGAGATCAAATTGGGTCAAAGTTGCAAAGGCTAACAATCTAGAAAAGAATGATGTTGTTCAAGTTTGGTCATTCCGAGTTGACGAGAAATTATGCATGGCAATTGTCAAGCTTTGA 1032 0.4176 METHKAKLRCQWLQCRPRSSSSGKNKLKEPLVDSDDSSNEVPFSSKRKAATAFGYCHGMREGANEEEKRMMNIKKTKIDCFIQNKQFDFNDDELEVVDILFNLPGNFLERVNLKTSSSAANSTASADQEQVSKEDSKMTVSSMDSHSKKETKKPVNTERNSPSAVNSGPSAYQERVSNKNSKKVISSVDSRSKKESKKPINQEPSELPQNFKNLISDMGGSRITLLIQKTLYQSDLDPQQNRLSIPSQQVKDKDFLLPTELESLEEKNGIKVKLIQPSLEITELTLIKWFMHKGPGSKKVSISYILRSNWVKVAKANNLEKNDVVQVWSFRVDEKLCMAIVKL 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01970 343 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF313)-RELATED 68 343 - -
Aip02g01970 343 MobiDBLite consensus disorder prediction 116 213 - -
Aip02g01970 343 SUPERFAMILY DNA-binding pseudobarrel domain 225 339 IPR015300 -
Aip02g01970 343 MobiDBLite consensus disorder prediction 130 156 - -
Aip02g01970 343 Pfam B3 domain-containing protein At2g31720-like 212 315 IPR005508 GO:0003677
Aip02g01970 343 MobiDBLite consensus disorder prediction 186 201 - -
Aip02g01970 343 MobiDBLite consensus disorder prediction 157 185 - -
Aip02g01970 343 MobiDBLite consensus disorder prediction 17 43 - -
Aip02g01970 343 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 68 343 IPR005508 GO:0003677
Aip02g01970 343 CDD B3_DNA 226 342 IPR003340 GO:0003677
Aip02g01970 343 Gene3D - 223 343 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01970 Aip-Chr2 85192105 85193136 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01970 206 340 B3 DNA Binding Superfamily AT1G05930 27.465 3.25e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01970 - - aip:110269262 664.455