Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01967 ATGGGTGGTAGCAGGATCACTCTACTTATCGAAAAAACTCTCTATAACTCGGATTTGAATCCGCAACAAAACCGGCTTTCAATACCATCACAGCAGGTCAAGGACAAAGATTTCTTGCTTCCCACGGAACTAGAAATTCTAGAGGAGAAAAAGGGAATAAAAGTGAAATTGATCCAACCTTCTCTCGAAATGACCGAGTTGACTTTGATTAAGTGGTTCATGCACAAGGGACCAAAGTCAGAGAAAGTAAGCATTTCCTATATTCTGAGATCAAATTGGGTCAAAGTTGCAAAGGCTAATAATCTAGGAGAGGATGATGTTGTTCAAGTTTGGTCATTCCGAGTTGAAGAGAAATTATGCATGGCAATTGTCAAGCTTTGA 381 0.3963 MGGSRITLLIEKTLYNSDLNPQQNRLSIPSQQVKDKDFLLPTELEILEEKKGIKVKLIQPSLEMTELTLIKWFMHKGPKSEKVSISYILRSNWVKVAKANNLGEDDVVQVWSFRVEEKLCMAIVKL 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01967 126 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 1 126 IPR005508 GO:0003677
Aip02g01967 126 Gene3D - 6 126 IPR015300 -
Aip02g01967 126 SUPERFAMILY DNA-binding pseudobarrel domain 8 122 IPR015300 -
Aip02g01967 126 Pfam B3 domain-containing protein At2g31720-like 7 98 IPR005508 GO:0003677
Aip02g01967 126 CDD B3_DNA 9 125 IPR003340 GO:0003677
Aip02g01967 126 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF313)-RELATED 1 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01967 Aip-Chr2 85137489 85137869 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01967 1 123 B3 DNA Binding Superfamily AT1G05930 29.231 1.47e-10 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01967 - - aip:107627510 239.965