Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01964 ATGGTAGCTTTGTCTAAAGATGTGGTGCCAGATGATGGTGATGTTGGAAAAACTTCAAATACTCAAGTGGTGGAGATAGAGTCTAAATACCAACAAATAGACTCTAATAATGTTCAGATGGAGCATCCTAATGCTACTCGAGATGACGCAGAGGATGAACTTGATCATGAGAAAATTCAGCGAGAAAATGCACATGCATTACAACAGCAACAGCAGGATTCTTTGGCATCTACTAGGCTAAAGATGAATTATAAATTTGTTCAGAAGTTCGGGTCAGACAAGCCTTTGAGACATTATGGACAGCTAAACTTGGTAGATTATGCACTCTCAGTGGAGGATGATGAGCCGGTCACCTTCAAACATgctatcaaagacaaagatagagagagttgTTGTAAGGTGGCGGCGGCAAGCCCTAGTAGTGGCGGTCAACGGCGCGACGGCGGCGCTACGGCTCAACCTCGGTGGTGCGAACGGCAACCCAAACAGCTCACATCCTTCCTTGCGCCAAACCACCTCTGCCTCTCTCTCAATCCCAGCATCGTCCTTCCTTCTCATTCGAGCTCGACGGCAACCACTACAGCCCCTTTCAGAGCAGCGACGTCGGCGAGGCGTGAGCTAGTGACTCCATGGACGGCGCCACAAAGCAGCTCGACGGCGAACTCCAGCGTGGTGGATCGACGGTGGCAAGGCCTCCCCTGCCTTCCTTCTTCTGTTTCTTTCTTCCGTGGTGAAGGAAGCTGGGATGCGTTGCGGCTGCGCATGATTGAGAAAGGGGAAGAGTGGGTTGGTGCTGTTGGGTTTAGAGAGGGGAAACATTGTGGGTGTGCTGAGGGAAACATTGCTGCTGCTGCGCTTCGAATTGGAgaaagggggagtgtgttgctgatgggaaaatcgggtaaccgggttagggttttaagGATTGTGGAGAGTGTAGGAGATGGTGTATCAAATCTCAAGCCTGGTGATCATGTTCTTCCACTGTTCACTGGAGAGTGTGGGGAATGCCCACACTGCAAGAGTGAAGATAGCAACATGTGTGAGGTGTTGCGAATAAACCCAACAAGAGAGGGTATGATAAGTGACGGAAAATCAAGGTTCTCTACTATAAAAGGCAAGGAACCTATAAGTCACTTCCTTGGCACATCCACTTTTAGCCAATACACAGTTGTTCATTCAGGAAGTGTTGTTAAGATCAATCCCACACTTCCTTTGGACAAAGCTTGTCTCCTCAGTTGTGGCATCTCAACAGGAATAGGATCAATTCTCAATGTTGCCAAACCAAAGAAGGGGGCTTCAATAGCAATATTTGGGCTTGGAACTGTTGGACTGGCTGCAGCCGAAGGTGCAAAAATTGCTGGAGCATCCAGGATAATTGGAATTGACAAGAATCCCAACAAACTTGAGTATGCCATGAAATTTGGACTAACAGACTTCGTAAATCCAGAAGAACATGAAAGACCAGTTCATGAGGTCCTCAAAGAGATGACAAATGGTGGAGTTGATAGGTGCATAGAATGCACTGGAAACATTAATGCCTTAATGTCTGCAATGGAAGCTCTCCATGATGGATGGGGTGTTGCTGTACTTGTCGGAGTGCCTAGTGGTGATGCAGTTTTCAAGACTAATCCCTTCAATTTTCTTAATGAAAAGACAATTACAGGCACAACCTTTGGGAACTACAAGCCTAAGACTGGCCTACCAACACTAGTTGATATGTTCATGAACAACAAATTGGAGCTGGGCAAGTTTATAACTCATAGAGTTCCTCTTTCTGAAATCAATAAAGCCTTTGATTACATGATCAAAGGACAAGGTCTAAGGACAATCATAGACATGAACGACTAG 1851 0.4419 MVALSKDVVPDDGDVGKTSNTQVVEIESKYQQIDSNNVQMEHPNATRDDAEDELDHEKIQRENAHALQQQQQDSLASTRLKMNYKFVQKFGSDKPLRHYGQLNLVDYALSVEDDEPVTFKHAIKDKDRESCCKVAAASPSSGGQRRDGGATAQPRWCERQPKQLTSFLAPNHLCLSLNPSIVLPSHSSSTATTTAPFRAATSARRELVTPWTAPQSSSTANSSVVDRRWQGLPCLPSSVSFFRGEGSWDALRLRMIEKGEEWVGAVGFREGKHCGCAEGNIAAAALRIGERGSVLLMGKSGNRVRVLRIVESVGDGVSNLKPGDHVLPLFTGECGECPHCKSEDSNMCEVLRINPTREGMISDGKSRFSTIKGKEPISHFLGTSTFSQYTVVHSGSVVKINPTLPLDKACLLSCGISTGIGSILNVAKPKKGASIAIFGLGTVGLAAAEGAKIAGASRIIGIDKNPNKLEYAMKFGLTDFVNPEEHERPVHEVLKEMTNGGVDRCIECTGNINALMSAMEALHDGWGVAVLVGVPSGDAVFKTNPFNFLNEKTITGTTFGNYKPKTGLPTLVDMFMNNKLELGKFITHRVPLSEINKAFDYMIKGQGLRTIIDMND 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01964 616 SUPERFAMILY GroES-like 309 422 IPR011032 -
Aip02g01964 616 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 404 579 IPR036291 -
Aip02g01964 616 Gene3D - 419 557 - -
Aip02g01964 616 PANTHER ALCOHOL DEHYDROGENASE 1-LIKE 309 614 - -
Aip02g01964 616 Coils Coil 47 67 - -
Aip02g01964 616 Pfam Alcohol dehydrogenase GroES-like domain 309 400 IPR013154 -
Aip02g01964 616 PANTHER ALCOHOL DEHYDROGENASE 309 614 - -
Aip02g01964 616 SUPERFAMILY GroES-like 564 612 IPR011032 -
Aip02g01964 616 MobiDBLite consensus disorder prediction 136 155 - -
Aip02g01964 616 Pfam Zinc-binding dehydrogenase 443 562 IPR013149 -
Aip02g01964 616 Gene3D - 309 606 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01964 Aip-Chr2 85064562 85075406 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01964 273 616 Monolignol Biosynthesis Gene Families AT1G72680 24.642 3.64e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01964 K18857 - ming:122089443 465.692