Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01953 ATGACAGAAGATAAGAGTACTGATAAAGAGCTAAGAAATAAGAAGAATAGCGTGTCAAAAGAAGGAGTGTCACCTAAGAAGAAAGGAAGTAATAAGACGGGTCCATCTAGTAGCAGGCCAAAGCAAAGAGTTGGGCATCTAAGTGGGTCAGAGGAGGGTGAGATTCCTAATGTGGATAATGGGCTTAATAACCCCAGTTCAGTCCTAACTAATGCGAAAATGGATAGTCATTATGATAAACCCTATGAGTATATAAGTGAGGCTTTCAATAGTCCAATTTCTTTTAAGGATGAAGGGAGGACAATTCATGACTCATTTAATGAAGATACTGAGTATGAAAAAGTTGTCTTTAAGGACTCAGAGATGGGAGATAAGAAAAAACCAACAAAAGTTGGCGGAGAAAGCCCAAGAGAAGATGCAACAAGAAGGATTTTTCCATGCCTATTTTGCTCAAGAACATTTTACAGTTCCCAAGCTTTAGGAGGGCACCAAAATGCTCACAAAAAAGAGAGAACAGCTGCAAGGAGATCCCAAAAATATTCTCAACCTTCTCCAAATCCACCACCACCTATGGCTTTTGCACCAACACTACACCAACTTGGGGTTTTGAATAGTAACCCTTCAATGTTCATCACTGCCCATGCTGCTAATTTTCATTGTCTTCAAAACAATCAAATAAATGAACAGTTTGGATCAAATAATGGTGCACCTAGATTTGGAAACTATCCATTTCTTCAGGGAAGAAGAATTTCAAGCAATAGTAATGGGTTTTTTTATGATGATGGTGAGAAAGGGTATTGTGGTAAATGGCAAAGTAGCATAAGAAGCAGTAATAGTAATGTTGGCATTAGAAGAGAGAAGGAGCACAAACTTGATTTGTCTCTTCATCTGTAG 894 0.3837 MTEDKSTDKELRNKKNSVSKEGVSPKKKGSNKTGPSSSRPKQRVGHLSGSEEGEIPNVDNGLNNPSSVLTNAKMDSHYDKPYEYISEAFNSPISFKDEGRTIHDSFNEDTEYEKVVFKDSEMGDKKKPTKVGGESPREDATRRIFPCLFCSRTFYSSQALGGHQNAHKKERTAARRSQKYSQPSPNPPPPMAFAPTLHQLGVLNSNPSMFITAHAANFHCLQNNQINEQFGSNNGAPRFGNYPFLQGRRISSNSNGFFYDDGEKGYCGKWQSSIRSSNSNVGIRREKEHKLDLSLHL 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01953 297 MobiDBLite consensus disorder prediction 1 74 - -
Aip02g01953 297 MobiDBLite consensus disorder prediction 29 44 - -
Aip02g01953 297 MobiDBLite consensus disorder prediction 57 73 - -
Aip02g01953 297 MobiDBLite consensus disorder prediction 1 27 - -
Aip02g01953 297 PANTHER PROTEIN LATE FLOWERING 138 297 - -
Aip02g01953 297 SUPERFAMILY beta-beta-alpha zinc fingers 142 172 IPR036236 -
Aip02g01953 297 MobiDBLite consensus disorder prediction 160 195 - -
Aip02g01953 297 Gene3D Classic Zinc Finger 120 187 - -
Aip02g01953 297 ProSitePatterns Zinc finger C2H2 type domain signature. 147 167 IPR013087 -
Aip02g01953 297 ProSiteProfiles Zinc finger C2H2 type domain profile. 145 172 IPR013087 -
Aip02g01953 297 PANTHER ZINC FINGER PROTEIN JAGGED 138 297 IPR045320 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01953 Aip-Chr2 84614795 84620725 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01953 94 246 C2H2 Transcription Factor Family AT5G25160 33.766 1.19e-16 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01953 - - gmx:100792059 154.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g01953 02 84614795 84620725 Aip02g01953 02 84614795 84620725 ECH