Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01949 ATGGCTTCTTCAAGCATGGAAGGATCAATGCCCACCATGGACGAATATGAGGCTCTCTTGTCAACCACCGACGTCGAACTTCTCAAGAGAGCATGGCGTAGCGAGAAGGCTGCTCCCGAGATTCTCCGCTACGATTTCGATCTCGTTGGCCGCGTCACCGAACAGCTTCAATTGATGGAGGAAACTGTGGAGGAGAAATCTACCAGTGGTGCTGACCCGCTTTCGTTGTCTTTATATCAGATGGACTTGGATAGGACCCTCTTTCTCTTGAGATCATATCTTCGGATCCGCATACAGAAGATTGAAAAATACATGTTCCACATTCGAAAAAGTGACGAGCTATGGAATAGGTTATCTAAAGGGGAGAAAGATTTCGCTTCAAGGAAAGGCTCTCTTTTAATCTACATACATATGCTTACTGATACCATGCTTGTTTTGGTTTTTGAATCTAACAAATCTTCGTGTTGCAGGTGCATAGATGACCTAAAACAACATCTCGAGGAGAGTGTTCTTTCGAAATTGCCTGAAAATTATCAATCCGTTGAGAAGCAATCTGTAATAAGTGAAGAGGATGACATGGTCCCAGAACCACGCCTAGACACATTCGTCTTATGTAGAAGCAAAGAGTATCTCTCTGGCATTCAACTTGAAGATGGACCTGTTGATGACAGGCAATTCTCTTACCCTTTCATGACTTTTTATTTCTCCCTGCTTAGGAAAAGGTCGAAGCTCTTTGAGATGGAGCCGGGTGTCCTTTACTTCATATGTTACAAATCAATAAAGCCACTTGTGGAGAGTGGGAAAATTGATCTTCTCTGA 819 0.4322 MASSSMEGSMPTMDEYEALLSTTDVELLKRAWRSEKAAPEILRYDFDLVGRVTEQLQLMEETVEEKSTSGADPLSLSLYQMDLDRTLFLLRSYLRIRIQKIEKYMFHIRKSDELWNRLSKGEKDFASRKGSLLIYIHMLTDTMLVLVFESNKSSCCRCIDDLKQHLEESVLSKLPENYQSVEKQSVISEEDDMVPEPRLDTFVLCRSKEYLSGIQLEDGPVDDRQFSYPFMTFYFSLLRKRSKLFEMEPGVLYFICYKSIKPLVESGKIDLL 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01949 272 Pfam GINS complex protein 56 122 IPR021151 -
Aip02g01949 272 CDD GINS_A_Sld5 24 128 IPR038749 -
Aip02g01949 272 Pfam DNA replication complex GINS protein SLD5 C-terminus 197 272 IPR031633 -
Aip02g01949 272 SUPERFAMILY GINS helical bundle-like 21 129 IPR036224 -
Aip02g01949 272 PIRSF GINS_Sld5 2 153 IPR008591 GO:0006261
Aip02g01949 272 PIRSF GINS_Sld5 146 272 IPR008591 GO:0006261
Aip02g01949 272 SUPERFAMILY PriA/YqbF domain 199 272 - -
Aip02g01949 272 Gene3D - 12 262 - -
Aip02g01949 272 PANTHER SLD5 PROTEIN 9 128 IPR008591 GO:0006261
Aip02g01949 272 PANTHER SLD5 PROTEIN 156 272 IPR008591 GO:0006261
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01949 1 193 Core DNA Replication Machinery Family AT5G49010 54.404 2.04e-60 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01949 K10735 - gmx:100784291 323.939