Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01910 ATGTCACCTGAGTGCAGCACTTCCATGGGTGTGGCCACACTTGCCACACTCATATCTATCCGCAATGGGATCATTGTCACCATCGCTCTGTGGGCTGGTAATGTTGATGTCCTGAATTGTTACTATGCTCATGGGGAGGATAATGAGAACTTTCAAAGGAAGTCAGAGCACATTGTTCTTGTACATTATCGTGATACTAAAGAACAATGGTCCAGGTGGCAAAGGAGGAAACCGGATGCTGATACGGTTTTCCTGAAAGCCATGGCAGAAATTGGGCAAGTAAAGCTTTATGGTGAGCACCCAACATTGATAGAAATGTCTCTTTACCGAGCAAGACGCCATCTTTATAAGGAAGAGAGGCTTCAGGCTGAGGAAGATAAATTGGAAGAGATTGGTCCGATGGCATACTATTCAGAATGGGTAAAAGCATGGAAAGGGGACACATCTCGTGAAGCTATTCAGAAGCATTTTAAAGAGACTGGTGAAGATGAAACTGCTCAACTAATTGAAATGTTCAGCCACCAAACTGATCGGGAGTATCGCATAATGATAGGAACTGATGTGCATATTAAAAGGGATCCTTTAGCAATGCGAATGAAGGAGAAACAGATAAAGAAAAATCCAAATGAAGTGATCGACTACAGGGGACCGGATTTCCATGAACCAACACCAAATATGCTGTCTTATCTAATGGAGCATGGACACATTATTACAAGGGAGGAACTCAACACTATTCTGGCAAAGGAGAAGCCTGAATAG 759 0.4295 MSPECSTSMGVATLATLISIRNGIIVTIALWAGNVDVLNCYYAHGEDNENFQRKSEHIVLVHYRDTKEQWSRWQRRKPDADTVFLKAMAEIGQVKLYGEHPTLIEMSLYRARRHLYKEERLQAEEDKLEEIGPMAYYSEWVKAWKGDTSREAIQKHFKETGEDETAQLIEMFSHQTDREYRIMIGTDVHIKRDPLAMRMKEKQIKKNPNEVIDYRGPDFHEPTPNMLSYLMEHGHIITREELNTILAKEKPE 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01910 252 Pfam CG-1 domain 30 65 IPR005559 GO:0003677
Aip02g01910 252 ProSiteProfiles CG-1 DNA-binding domain profile. 1 72 IPR005559 GO:0003677
Aip02g01910 252 PANTHER PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 12, CHLOROPLASTIC 55 251 IPR034581 GO:0005634|GO:0006355|GO:0009416|GO:0009507|GO:0090228
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01910 Aip-Chr2 83270441 83273412 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01910 30 67 CAMTA Transcription Factor Family AT2G22300 60.870 8.30e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01910 - - sind:105175928 317.775