Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01902 ATGATGCCTAAACTTGATATTGTGTCTATTAAGGTAATGGTAAAGCCATCGTCTCCAACCCCTAATCACCTTAGAGATTTCAAAATCTCCCTCGTTGATGAGATGGCTCCTCCAATCTATATTCCCATAATTTTATTCTACTCAGCCACTGATATTAATAGTTCCTTTGGAACTCATGATGTCGAGACCATATCCAATAAATTAAAGGTTTCTTTATCCAAAGTTCTCACTCTATATTACCCATTCTGTGGAAGATTCAAATGTACCTCACCATCCTCTGTTGATTGTAATGATGAAGGTGTACCTTACATCGAGTGTAAATTCCCCACTAACCTTGTAGATATTCTCAAAAGGCCTCAATCCCAAATGCAGGAGCTTTTGCCATTTGACCCATATAATAATGTTTCTAGTAGTTTGGATCAAAATGATGACAAACACAAAGTGACCATGGCGGTTCAGTTGAGTGAATTCAAGTGTGGGGGTATTGCACTTGGTGTGTGCCTCTCACACAGGGTAGCAGATGGCGAAGCAACATCATCATTCCTCAATGCTTGGGCTAAAACTGCAAAGGGTCTTTTCAACCAAGTAGACCCACCTCAAATGGATGCAGCTTTGAGTTTCCCTCCACGGGGAATAGAATGGGCCATCACTAGTCTCATGGTCGGTGGTGGCAATGAAAAACTCGTGACCAAGTGTTTCTTGTTTAGTCCAACGGACTTGTCCAGATTGAGAGCTAGATTTGGAAGCTTTAATCCGACTCGCGTCGAAGCTGTCACAGCACTCATATGGAAATCAGCAATTCAAGTAGCAAAAGGAAGTTCTTCTGGGGAGTGTAACAGAACCTGTTACAAGGCTTCTATGGTGTGCCATGCCGTCGACATTCGTAATCGAATGGTGCCACCGTTGCCAAAAAACTTGTTTGGCAATCTTTGGCTTTATTCTATTTCTGAATTGGTGGATTTGGGTGACGGAGGTTATGGAACAGAAGAGTTGTGTGATTTGGTGGGGATGGTTAGGAATGCTATTAGAGAAACTAGTGCGGGTTATTCAGATATGCTGCTTCAAGGTGACGGTTTGGATGAGTTCGATGAATTCTTCAAGGAAGCAAGATTAAGGGTCGCTGAAAATCTTGTTGCATGCTGTGGATTTAGTAGTTGGACAAGATTTGGTTTCTATGAAGTTGATTTTGGATGGGGGAAGCCAATTAAGGTGAGAAACATTAATTTGCCTATGAAGAATGTGACATATTTGATTCCTACAAGAACTGGGGATGGCATAGAGGCTTAA 1287 0.4172 MMPKLDIVSIKVMVKPSSPTPNHLRDFKISLVDEMAPPIYIPIILFYSATDINSSFGTHDVETISNKLKVSLSKVLTLYYPFCGRFKCTSPSSVDCNDEGVPYIECKFPTNLVDILKRPQSQMQELLPFDPYNNVSSSLDQNDDKHKVTMAVQLSEFKCGGIALGVCLSHRVADGEATSSFLNAWAKTAKGLFNQVDPPQMDAALSFPPRGIEWAITSLMVGGGNEKLVTKCFLFSPTDLSRLRARFGSFNPTRVEAVTALIWKSAIQVAKGSSSGECNRTCYKASMVCHAVDIRNRMVPPLPKNLFGNLWLYSISELVDLGDGGYGTEELCDLVGMVRNAIRETSAGYSDMLLQGDGLDEFDEFFKEARLRVAENLVACCGFSSWTRFGFYEVDFGWGKPIKVRNINLPMKNVTYLIPTRTGDGIEA 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01902 428 Pfam Transferase family 11 426 - -
Aip02g01902 428 Gene3D - 225 428 IPR023213 -
Aip02g01902 428 Gene3D - 4 213 IPR023213 -
Aip02g01902 428 PANTHER N-BENZOYLTRANSFERASE PROTEIN, PUTATIVE-RELATED 7 428 - -
Aip02g01902 428 PANTHER F21J9.9 7 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01902 Aip-Chr2 82877027 82878313 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01902 12 425 Monolignol Biosynthesis Gene Families AT5G48930 27.438 6.39e-33 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01902 - K13065 gmx:100792323 370.163