Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01900 ATGCTCACTGGACTGAACACAATATACCGGACCCGAAGCTTTCTGGCACACGTAGAAGTTGATTCAGAGGAGAAGGAGAGGCAGACGGCTAGCCCAAGCACGACGACCACGACGGTGATGACAAACCAGGATACGCAGAGGCAGAGCAAAGATCTGAGAGAGAGAGCAGAAGAGGGAAGAGAGGACTTGAGGAAGAGAAAGGGAGAAGAAGGAAGACTCGCGCAGGAGGAAAGGGAGACCGCCGCTGCAGCTGCGCCACCGCCACCGCGTCCTGCTGCCTGCACTGCCACCATTCAGCTTGAGCCAACACTGTGCCATTCGTCACCATTCTCTTCCTCCATCGTCTCCCCTAGCCCGTCTCTGCTAGCGCTCGCACTCCCTCGGTGCTCACTACTCACCGCATCGGTCAGCCAACAGAGGTCGCCTTTCCTTCCTCTGTGCCACCAATCTATCGTATCTTCTGGATCTGCTTTAATGGGTAAGGGAACAGGGAGCTTTGGTAAGAGGAGGAACAAGACTCACACCCTCTGTGTGAAGTGCGGCCACCGCAGCTTTCACCTCCAGAAGAGTCGTTGCTCTGTCTGTGCTTCTCCCACTGCACAAAGACCCACCGGCACTAGCAGGATGAGGTACCTCTGCCACGTGCCTCGCCGATTCCAGAGCTGCTTCAGAGAAGGTACTGAAGCTGCACCAAGGAAGAATGGAGCAGCTGCATCTAGAGAGACCGATGATCTTGAACTTGGAAGCTCCAATTTCCCTGTGGTTTTCATCCAGATTCCAATGTTCAATGAGAAAGAGGTATACAAGGTGTCAATTGGTGCATCTTGTAATCTTTCGTAG 840 0.5381 MLTGLNTIYRTRSFLAHVEVDSEEKERQTASPSTTTTTVMTNQDTQRQSKDLRERAEEGREDLRKRKGEEGRLAQEERETAAAAAPPPPRPAACTATIQLEPTLCHSSPFSSSIVSPSPSLLALALPRCSLLTASVSQQRSPFLPLCHQSIVSSGSALMGKGTGSFGKRRNKTHTLCVKCGHRSFHLQKSRCSVCASPTAQRPTGTSRMRYLCHVPRRFQSCFREGTEAAPRKNGAAASRETDDLELGSSNFPVVFIQIPMFNEKEVYKVSIGASCNLS 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01900 279 MobiDBLite consensus disorder prediction 47 77 - -
Aip02g01900 279 Pfam Ribosomal protein L37e 161 200 IPR001569 GO:0003735|GO:0005840|GO:0006412
Aip02g01900 279 MobiDBLite consensus disorder prediction 20 91 - -
Aip02g01900 279 Gene3D - 159 232 IPR011331 GO:0003735|GO:0005840|GO:0006412
Aip02g01900 279 PANTHER 60S RIBOSOMAL PROTEIN L37 149 239 - -
Aip02g01900 279 Coils Coil 42 62 - -
Aip02g01900 279 SUPERFAMILY Zn-binding ribosomal proteins 159 202 IPR011332 GO:0006412
Aip02g01900 279 MobiDBLite consensus disorder prediction 29 46 - -
Aip02g01900 279 PANTHER RIBOSOMAL PROTEIN L37 149 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01900 Aip-Chr2 82844436 82857348 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01900 159 239 Cytoplasmic Ribosomal Protein Gene Family AT1G15250 63.830 1.87e-36 124