Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01898 ATGATGCCTAAACTTGATATTGTGTCTATTAAGGTAATGGTAAAGCCATCGTCTCCAACCCCTAATCACCTTAGAGATTTCAAAATCTCCCTCGTTGATGAGATGGCTCCTCCAATCTATATTCCAATAATTTTATTCTACTCAGCCACTGATATTAATAGTTCCTTTGGAACTCATGATGTCGAGACCATATCCAATAAATTAAAGGTTTCTTTATCCAAAGTTCTCACTCTATATTACCCATTCTGTGGAAGATTCAAATGTACCTCACCTTCCTCTGTTGATTGTAATGATGAAGGTGTACCTTACATCGAGTGTAAATTCCCCACTAACCTTACAGATATTCTCAAAAGGCCTCAATCCCAAATGCAGGAGCTTTTGCCATTTGACCCATATAATAATGTTTCTAGTAGTTTGGATCATAATGATGACAAACACAAAGTGACCATGGCGGTTCAGTTGAGTGAATTCAAGTGTGGGGGTATTGCACTTGGTGTGTGCCTCTCACACAGGGTAGCAGATGGGGAAGCAACATCATCATTCCTCAATGCTTGGGCTAAAACTGCAAAGGGTCTTTTCAACCAAGTAGACCCACCTCAAATGGATGCAGCATTGATTTTCCCTCCACGGGGAATAGAATGGGCCATGACTAGTCTCATGGTGGGTGGTGGCAATGAAAAACTCGTGACCAAGTGTTTCTTGTTTAGTCCAACGGACTTGTCCAGATTGAGAGCTAGATTTGGAAGCTTTAATCCGACTCGCGTCGAAGCTGTCACAGCACTCATATGGAAATCAGCCATTCAAGTAGCAAAAGGAAGTTACAAGGCTTCTATGGTGTGCCACGCCGTCGACATTCGTAATCGAATGGTGCCACCGTTGCCAAAAAACTTGTTTGGCAATCTTTGGCTTTATTCTATTTCTGAATTGGTGGATTTGGGTGACGGAGGTTATGGAACAGAAGAGTTGTGTGATTTGGTGGGGATGGTTAGGAATGCTATTAGAGAAACTAGTGCGGGTTATTCAGATATGCTGCTTCAAGGTGACGGTTTGGATGAGTTCGATGAATTCTTCAAGGAAGCAAGATTAAGGGTCGCTGAAAATCTTGTTGCATGTTGTGGATTTAGTAGTTGGACAAGATTTGGTTTCTATGAAGTTGATTTTGGATGGGGGAAGCCAATTAAGGTGAGAAACATTAATTTGCCTATGAAGAATGTGACATATTTGATTCCTACAAGAACTGGAGAAGGCATAGAGGCATGGGTAACCATGACCGAGCTTGATATGGATGAATTCCAGCGTAACTCCGAGCTTCTCCAGTTTGCCTTGCTGGAATCTTAA 1338 0.4185 MMPKLDIVSIKVMVKPSSPTPNHLRDFKISLVDEMAPPIYIPIILFYSATDINSSFGTHDVETISNKLKVSLSKVLTLYYPFCGRFKCTSPSSVDCNDEGVPYIECKFPTNLTDILKRPQSQMQELLPFDPYNNVSSSLDHNDDKHKVTMAVQLSEFKCGGIALGVCLSHRVADGEATSSFLNAWAKTAKGLFNQVDPPQMDAALIFPPRGIEWAMTSLMVGGGNEKLVTKCFLFSPTDLSRLRARFGSFNPTRVEAVTALIWKSAIQVAKGSYKASMVCHAVDIRNRMVPPLPKNLFGNLWLYSISELVDLGDGGYGTEELCDLVGMVRNAIRETSAGYSDMLLQGDGLDEFDEFFKEARLRVAENLVACCGFSSWTRFGFYEVDFGWGKPIKVRNINLPMKNVTYLIPTRTGEGIEAWVTMTELDMDEFQRNSELLQFALLES 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01898 445 Gene3D - 4 213 IPR023213 -
Aip02g01898 445 PANTHER N-BENZOYLTRANSFERASE PROTEIN, PUTATIVE-RELATED 7 441 - -
Aip02g01898 445 Gene3D - 225 440 IPR023213 -
Aip02g01898 445 PANTHER F21J9.9 7 441 - -
Aip02g01898 445 Pfam Transferase family 11 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01898 Aip-Chr2 82761442 82762779 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01898 12 433 Monolignol Biosynthesis Gene Families AT5G48930 26.770 2.77e-34 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01898 - K13065 gmx:100792323 403.29