Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01883 ATGTGCCTTGCATCTCTAAGTTCTCTTGTCAAAGAAGACTTGTTCAAGTCTAAGTCACATTTGCTTTTGAAGTATGTTAAAGCTTCAGAGCACTTCAGCATCAACCAGATTCAGGGGCATTTCAGAGAAGAGAAGCAGTTAGGGTTTTCAGACAACTGCAATCCCTGCCATTTTCATACCCTTCCTCTGCTGCAAATTTCCGCCACCTACTTCCGCCGACGCGCCACGCCTCCGCCGCCGCCGCACCCTGCCTCCGCCTCGCCCTGCTTCCGCCGCCGCGCCACGCCTCCCACGCTCAATAAGACAAGAGGTTTCTGCGGCCCTAAATCGCTCATCTGGTTCATCAGATATCTGAGGTTGTCAATACTCAATTCCATGAAAGATCTGATAGATATCTGTCGGGAGCACAAAATTGGTGCAATTGCCAATCAATTGGAAGAATTGCTTCCTGGAACTATCCATCGAAAGGAGAGGTTCTATGCTTTAGCTCTTTGTTATTACGAAGCAGGGAAGAACGTGGAAGCGCTGGATCTTCTTAGAAAACTGCTGAGTAATAGAGAGGACCCAAGACATGTTCCAAGTTTGTTAATGGATTCTAAGATTTGTTGCGAGAACTTCAGTGTTACAAAAGACCCTGGGGTAAGCTTTGCTCGGATGGCACTTGAGAACTTGGATGGAAAATGTAATCAGTTAGAAAATATGGCCAATTTCTTACTTGGTGTTACACTTTCTGCATACTCGAAATTGGCCATTTCTGATGCTGAGAGGGCTAAGAGACAATCTGAGGCACTTCATACCCTTGAAACTGCCTGCAAATTGAGCAGAATGGAAGACCCTGTTGTATTATACCATCTGAGTTTAGAATACGCTGAGCAACGGAAGTTGGATGCTGCACTTCATTATGCTAAGTGCATTGTAAAACTTGAAGTTGGCTCTAATGTTAAAGGTTGGTTACTGTTATCTAGGGTATTATCCGCACAAAAGCGGTTCTTAGATGCTGAATCTATTATCAATGCTGCTTTGGATCAGACTGGGAAATGGGATCAAGGTGATTTGTTACGAACAAAGGCGAAACTTCAGATCGCTCAGGGCCAGTTAAAGAGTGCCATTGAGACATACACTCAGCTTCTTGCTGTTCTTCAAGTTCATAGTAAAAGTTTTGGTTCTCGGAATAAGCTATTTAAGGACAAAAGAGATCAGATTAGGAATTTGGAAGTTGAAGTATGGCATGATCTTGCTTATGTATACATCAGCCTTTCACAGTGGCGTGACGCAGAGGCCTGCCTTTCAAAATCTCGGGCCATCAAACTATACTCTTCTACTAGATGTTATGCAATAGGGTAA 1344 0.4397 MCLASLSSLVKEDLFKSKSHLLLKYVKASEHFSINQIQGHFREEKQLGFSDNCNPCHFHTLPLLQISATYFRRRATPPPPPHPASASPCFRRRATPPTLNKTRGFCGPKSLIWFIRYLRLSILNSMKDLIDICREHKIGAIANQLEELLPGTIHRKERFYALALCYYEAGKNVEALDLLRKLLSNREDPRHVPSLLMDSKICCENFSVTKDPGVSFARMALENLDGKCNQLENMANFLLGVTLSAYSKLAISDAERAKRQSEALHTLETACKLSRMEDPVVLYHLSLEYAEQRKLDAALHYAKCIVKLEVGSNVKGWLLLSRVLSAQKRFLDAESIINAALDQTGKWDQGDLLRTKAKLQIAQGQLKSAIETYTQLLAVLQVHSKSFGSRNKLFKDKRDQIRNLEVEVWHDLAYVYISLSQWRDAEACLSKSRAIKLYSSTRCYAIG 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01883 447 Gene3D Tetratricopeptide repeat domain 345 442 IPR011990 GO:0005515
Aip02g01883 447 SMART tpr_5 314 347 IPR019734 GO:0005515
Aip02g01883 447 SMART tpr_5 279 312 IPR019734 GO:0005515
Aip02g01883 447 SMART tpr_5 350 383 IPR019734 GO:0005515
Aip02g01883 447 SMART tpr_5 406 439 IPR019734 GO:0005515
Aip02g01883 447 SMART tpr_5 156 189 IPR019734 GO:0005515
Aip02g01883 447 SUPERFAMILY TPR-like 157 435 IPR011990 GO:0005515
Aip02g01883 447 Gene3D Tetratricopeptide repeat domain 140 344 IPR011990 GO:0005515
Aip02g01883 447 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 137 447 - -
Aip02g01883 447 PANTHER PROTEIN NPG1 137 447 IPR043376 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01883 Aip-Chr2 82080808 82087479 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01883 140 447 Calmodulin-binding Proteins AT4G28600 52.396 1.85e-93 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01883 K21843 - gmx:100800762 468.774