Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01873 ATGCTACATTCTCTTTTTCTCCTGCTTGGAGCTCTTTCTCTCTTAACACTGGTCATAGGGCAGGATCAATCAGGATTCATTAGCATAGATTGTGGATTACCTGAAAATTTTAGCTACACTGAAAAGAACACAGGAATCAATTATATTTCAGATGCTAATTTCATTGATTCCGGTGTGAGTAAGACTCTATCGCCTGAAGATAGGATTACTCATCAACAACAATTTAGTTACCTAAGGAGTTTCCCTAATGGTGTGAGAAACTGTTACAAAATAAACATGACAAGTGGTGTTGATTATTTAATCAGAGCTAGTTTCTTGTACGGAAACTATGATGGTCTTAATAAACTCCCACAATTTGAACTTCATGTTGGACCAAATGTGTGGGAAACAGTGAAATTCACAAACTCATCAATCAGCGTAAACTATGAGATCATCTACTCTTCATCACAGGATCATATACATCTCTGTCTCGCTAACACAGGCACTGGGACACCGTTTATTTCGGTAATAGAATTGAGGACTTTGCCAAATGATACTTACAGCATTAGCATACAGTCGGTTGGATCATTGGCACGTGTCCTAAGACTAGATCTCGGTTCCATCACCAACTTAACATACAGGTACAAAGATGATCCATACGACCGTTTATGGGAACCTTATTCGAACAAGGAGTGGACACAATTAAGCACCTCACTTAACACTGATGATCTAAATAATACAGTATCAATGCCACCTGTAATTGTCATGAGCACTGCTGCCACACCAAGAAATTCTAGTGCCTCTTTGGATTTTAAGTGGGATGCAAATACTATAACTGACCGTATTTATTTCTACCTACATTTTAATGAGATCCAAAAACTGAAAGCAAATGAAACTAGGTCATTCAATATCACCCTCAATGGACAGAGTTCTCTACCCTTCCACCCATCATCAATGCTCTTAGAAACTCAAAAAGATGATGTTGATGCTATCACAAACATCAAGCTAGCCTATAGGGTGACTAGAAATTGGCTTGGAGATCCATGTGGCCCTGAAGCATACAAGTGGGATGGTCTAGATTGTAATTTTGATGGCGATGGGATCCCAAGAATCACTTCGATGAACTTGTCTACAAGTGGATTGACAGGACACATAGTTCCTGATCTCTTAAAGCTTACTATGCTAAAGTCATTGGATTTATCGAACAATAACCTAACTGGGGATGTTCCTTATTTTCTGGCACAACTGCAATCACTACAAAACTTAAACTTGGAGAACAACAACCTATCAGGTTCAATTCCAAATGAACTCTTTCAAAAACAAAGAGATGGTATATTATCATTAAGGGTGGGACAAAATCCAAATTTATGTGCCTCAACTTCATGCAACCAACAAACAAATGATACAAAGAAGAAAAAGCATAATGCAGTTATTATAGTGCTAGCATCAATTGCAGGGATATTGCTTCTTCTTGTGATTGCAGCAGTTATAACCTTTTACCAAAGCAAATATTATGATGTTGATAAAAGCATTATTCTTGGAAAGCCTCGTAATTCAATTAAGGGGTCAGAATTGGAATTGAAGCAACGACAATATTCATTTAATGAAGTTGTTAAGATCACCAACAGCTTTGATAGGATTCTTGGCAGAGGTGGATTTGGAACTGTATATgggagatccatttccGGATTTATTGAGGACACTCAAGTGGCTGTCAAGATGCTTTCCCTATCATCGGTGCATGGATATCAACAATTTGTTGCAGAGGCGAATCATGTGACTTCTGAATGGCAGGTTAAGCTTCTAATGAGAGTACATCACCGAAGTCTGACTTCTCTTATTGGTTATTGCAACGAAGAAACTAATATAGGACTCATCTATGAATATATGGCAAATAATGGAAACTTAAATGAATATCTTTCAGGAGGAAACAATAAGGAAAAGTCATTGAATTGGGAAGATAGACTTCGAATAACATTGGACGCAGCCCAAGGATTGGAATATCTGCATAATGGTTGTAAGCCACCTATAATCCACAGAGATGTAAAATGTACAAATATTCTATTAGATGAAAACTTTCATGCCAAACTAGCTGATTTTGGATTATCCAAATGTTTTGCTGTTGATGGTGATACACATGTGTCAACAATTGTCGCCGGAACTCCAGGCTACCTAGATCCTGAGTACACGACATCAAACAGACTAACAGAAAAAAGTGATGTGTATAGTTTTGGAGTAGTTCTTTTAAGGATAATCACAGGTCAACCGGTGATAATAGGAAGGGAAGATATGACTCATCATATAAGTCAATGGGTCAACTCCATGGTTGCTAAAGGGGATATAACAAAAATTGTTGACTCAAGGTTACAAGGAGATTTTGATAGCAACTCTGCATGGAGAGCGGTTGAAATAGCAATGGCCTCTGTGTCTGCCATTTCGATGGAAAGGCCATACATGACTGATATAGTAAAAGAGCTAAAGGAGTGTTTGGCTGCAGAGTTAGCTCGAAAACATAATAGTTGTGACATTCAAAACGAAGATTTAGTTGGGCACTTGGGCAGGTAA 2544 0.3774 MLHSLFLLLGALSLLTLVIGQDQSGFISIDCGLPENFSYTEKNTGINYISDANFIDSGVSKTLSPEDRITHQQQFSYLRSFPNGVRNCYKINMTSGVDYLIRASFLYGNYDGLNKLPQFELHVGPNVWETVKFTNSSISVNYEIIYSSSQDHIHLCLANTGTGTPFISVIELRTLPNDTYSISIQSVGSLARVLRLDLGSITNLTYRYKDDPYDRLWEPYSNKEWTQLSTSLNTDDLNNTVSMPPVIVMSTAATPRNSSASLDFKWDANTITDRIYFYLHFNEIQKLKANETRSFNITLNGQSSLPFHPSSMLLETQKDDVDAITNIKLAYRVTRNWLGDPCGPEAYKWDGLDCNFDGDGIPRITSMNLSTSGLTGHIVPDLLKLTMLKSLDLSNNNLTGDVPYFLAQLQSLQNLNLENNNLSGSIPNELFQKQRDGILSLRVGQNPNLCASTSCNQQTNDTKKKKHNAVIIVLASIAGILLLLVIAAVITFYQSKYYDVDKSIILGKPRNSIKGSELELKQRQYSFNEVVKITNSFDRILGRGGFGTVYGRSISGFIEDTQVAVKMLSLSSVHGYQQFVAEANHVTSEWQVKLLMRVHHRSLTSLIGYCNEETNIGLIYEYMANNGNLNEYLSGGNNKEKSLNWEDRLRITLDAAQGLEYLHNGCKPPIIHRDVKCTNILLDENFHAKLADFGLSKCFAVDGDTHVSTIVAGTPGYLDPEYTTSNRLTEKSDVYSFGVVLLRIITGQPVIIGREDMTHHISQWVNSMVAKGDITKIVDSRLQGDFDSNSAWRAVEIAMASVSAISMERPYMTDIVKELKECLAAELARKHNSCDIQNEDLVGHLGR 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01873 847 ProSiteProfiles Protein kinase domain profile. 535 842 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g01873 847 Pfam Malectin-like domain 29 315 IPR024788 -
Aip02g01873 847 Gene3D Transferase(Phosphotransferase) domain 1 624 842 - -
Aip02g01873 847 SUPERFAMILY L domain-like 340 433 - -
Aip02g01873 847 ProSiteProfiles Leucine-rich repeat profile. 411 433 IPR001611 GO:0005515
Aip02g01873 847 Gene3D Phosphorylase Kinase; domain 1 522 622 - -
Aip02g01873 847 ProSitePatterns Serine/Threonine protein kinases active-site signature. 670 682 IPR008271 GO:0004672|GO:0006468
Aip02g01873 847 Pfam Leucine Rich repeats (2 copies) 386 426 IPR025875 -
Aip02g01873 847 PANTHER OS07G0107800 PROTEIN-RELATED 12 302 - -
Aip02g01873 847 SUPERFAMILY Protein kinase-like (PK-like) 517 819 IPR011009 -
Aip02g01873 847 PANTHER PUTATIVE-RELATED 12 302 - -
Aip02g01873 847 PANTHER PUTATIVE-RELATED 314 835 - -
Aip02g01873 847 PANTHER OS07G0107800 PROTEIN-RELATED 314 835 - -
Aip02g01873 847 Gene3D Ribonuclease Inhibitor 321 438 IPR032675 -
Aip02g01873 847 SMART serkin_6 535 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g01873 847 Pfam Protein tyrosine and serine/threonine kinase 537 818 IPR001245 GO:0004672|GO:0006468
Aip02g01873 847 PRINTS Leucine-rich repeat signature 409 422 - -
Aip02g01873 847 PRINTS Leucine-rich repeat signature 388 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01873 Aip-Chr2 81576313 81605732 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01873 5 833 Receptor kinase-like Gene Family AT1G51800 46.016 0.0 728
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Aip02g01873 Malectin_like 5.4e-98 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01873 - - ahf:112775583 1147.5