Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01870 ATGTTGGATTGTGCTAGGTGTAAAATTACGTCTACATGCGAAGATGATGTTAAAAATGATTCTGGTAATGATTTGGGTGATGATTTCAATTATGAACCGAATTCACATGATGATGTTGAAGATGATGATGGTGATTCATTGGATGTTACTAGAAAAAGTGAACATGATTGTGATGTTAAAAGAATAGCAGATTTAATGGTAGAGGGCATTTGGAACCTGGAGTTTAGGACAGAGGATGAAGCTTGCCAATTTTATAATGACTATGCTTGTTGGCATGGCTTTGTAATGAGGAAGGATGACATCGTTAGAGATAAGGAAGGTAAAATAATTTGTAGGCAACTTGTTTGCAATAAAGAGGGGCGCAGAAATATGAGATATCTTGATTTGGAGAATCGATCAAGGGAGGCAAGGTCAATCATGCGAACTAAGTGCCCAGCACGACTTAAGGTTAAGGTTGACTACGGCTGTGGTAGACGGAAAGTATCATGTTTTGTGGAATCTCACAATCATNNCTCCAGCCAATTGTCGTCTTACTGTTACTAA 543 0.3812 MLDCARCKITSTCEDDVKNDSGNDLGDDFNYEPNSHDDVEDDDGDSLDVTRKSEHDCDVKRIADLMVEGIWNLEFRTEDEACQFYNDYACWHGFVMRKDDIVRDKEGKIICRQLVCNKEGRRNMRYLDLENRSREARSIMRTKCPARLKVKVDYGCGRRKVSCFVESHNHXSSQLSSYCY 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01870 180 MobiDBLite consensus disorder prediction 18 33 - -
Aip02g01870 180 Pfam FAR1 DNA-binding domain 83 171 IPR004330 -
Aip02g01870 180 MobiDBLite consensus disorder prediction 18 45 - -
Aip02g01870 180 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 30 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01870 Aip-Chr2 81349803 81350345 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip02g01870 FAR1 9.5e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01870 - - adu:107460934 273.092