Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01867 ATGGTGGTGGTAACTGCAAGTGGTCACTGCCGGTGTCGATTGTGGTATAGACGGTGGAGTTCCTTCTTTCCGTTGGAGGAAGACTGGAAGAGGAAATTAGGGTTGAGGGAGGCGTGGAAAGTGGCTCTTCGAAGGGTGGGTTGGggcagttctgggagtcaaccgatcagTCTTCAGCAGCACAGGAAGCAACGCGAAGTTGTAGCAGGCGCCTTCAGAAACTTTTGGCGCGTTCTACCTGTTGATAACGTTACACCATTGCCCACCTTCTCAAGCATGAGTTCTCCAGGATCATCCTCAACCTCAAGAGTTTCAGTAGAAGAGCAAGCCCCATTGCCAAAGCCGGCTGATCCTGCAGCAAACTTATCGAGCGATGAGATTGCACCACTTTCAGGAAATCCATTCTTTCATGTAGTTCTTTCAAAATCACATGTTCGTCGTAGTTGTCTCATGGGGCCATCAAAGGACTTAGTAGATATACTTCCATCTGCTGAGGTCCCTACTGTTCTTAAGTGTGGAGGTGAGAGCTGGGACATGGTGTATCGTGGACATGCTCCGGGTCGCAAGTTCTTCGATGGAGGCTGGAGAAAATTTGTCAAAGCTAATTGTTTGGTAGAGGGAGATGCTTGTGTTTTCGAGCTCATGGCAAACAGTGATGAGAAAATTGTCTTTGAAGTTCAAATTCTCAGAGGTGATGTCCCCAAAGTGTTTTTTAAAAGGGATAGAATTGGTGAAAGTGAACAGAAGCCAATTGTCATTGACTAG 765 0.4523 MVVVTASGHCRCRLWYRRWSSFFPLEEDWKRKLGLREAWKVALRRVGWGSSGSQPISLQQHRKQREVVAGAFRNFWRVLPVDNVTPLPTFSSMSSPGSSSTSRVSVEEQAPLPKPADPAANLSSDEIAPLSGNPFFHVVLSKSHVRRSCLMGPSKDLVDILPSAEVPTVLKCGGESWDMVYRGHAPGRKFFDGGWRKFVKANCLVEGDACVFELMANSDEKIVFEVQILRGDVPKVFFKRDRIGESEQKPIVID 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01867 254 MobiDBLite consensus disorder prediction 90 123 - -
Aip02g01867 254 MobiDBLite consensus disorder prediction 90 107 - -
Aip02g01867 254 Gene3D - 120 232 IPR015300 -
Aip02g01867 254 Pfam B3 DNA binding domain 136 225 IPR003340 GO:0003677
Aip02g01867 254 ProSiteProfiles B3 DNA-binding domain profile. 135 232 IPR003340 GO:0003677
Aip02g01867 254 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 92 238 IPR044837 -
Aip02g01867 254 SMART B3_2 136 232 IPR003340 GO:0003677
Aip02g01867 254 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS04G0386900 92 238 - -
Aip02g01867 254 CDD B3_DNA 134 230 IPR003340 GO:0003677
Aip02g01867 254 SUPERFAMILY DNA-binding pseudobarrel domain 131 230 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01867 Aip-Chr2 81259685 81266839 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01867 133 230 REM Transcription Factor Family AT1G49480 36.634 6.57e-10 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Aip02g01867 B3 1.8e-13 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01867 - - adu:107474771 315.079