Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01851 ATGGCTTCAACAAAGTTGCCTTCAGGTGCAAGCAAGAAGTTCAAGCCTACAGATGAAGAACTCATTCAAGATTTTCTCCTTAACAAAATCAATGGGAGGCCTCTACCAAACAATGGAACCATTCTTGAAGGTGAAATGTTTGGTACGGAGAAGAATCCATGGGAAATTTGGGAAGAAAACGTTGAAAATTCTTATGACGGGAAGGACCTCTATTTCTTCACTACTCTAAAAAGGAAGTTCTCAACTAACAGCTTGCGGATGGTTCGCACCATTGGGTTGGGTTCTTGGGAAGGTGAAGACATCGGAAAAGAGATTATGGCCAATAAAACTAACCAGCGCATTGGAATGAGGAAACGATATCGCTTTGAGAAGAGTGTTTTTGTTTTATGCCTTTCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATTAGAGAATGGAGATGAAAGGATGGAGATTCAAAATGAATCACCAAACCAATCAGACAAAGCAAACCAATCAGAGAATAATGGAGATGAGAAGATTGATGAGATTCAGAGAGAACTAACAAATCAATTAGAGAATAATGAGGATGAAATACAGGTTGAGGCTTTTGATACTACTATTGGAATTGAGGCAAACTGTGAGGAAAGGAAGCCCATGGCCAGCTTCGCCGCACTGAGCTTGGCCGCTTGCTCACACCATAACTTCGATGAGGCTAAGGGGAACTGCCAAGAAACTGGAGCACGACCCCGCCGCGGGAGGTAG 759 0.4216 MASTKLPSGASKKFKPTDEELIQDFLLNKINGRPLPNNGTILEGEMFGTEKNPWEIWEENVENSYDGKDLYFFTTLKRKFSTNSLRMVRTIGLGSWEGEDIGKEIMANKTNQRIGMRKRYRFEKSVFVLCLSSSSSSSSSSSSSSSSLENGDERMEIQNESPNQSDKANQSENNGDEKIDEIQRELTNQLENNEDEIQVEAFDTTIGIEANCEERKPMASFAALSLAACSHHNFDEAKGNCQETGARPRRGR 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01851 252 MobiDBLite consensus disorder prediction 133 152 - -
Aip02g01851 252 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 13 124 - -
Aip02g01851 252 SUPERFAMILY NAC domain 12 123 IPR036093 GO:0003677|GO:0006355
Aip02g01851 252 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 13 124 - -
Aip02g01851 252 Pfam No apical meristem (NAM) protein 13 124 IPR003441 GO:0003677|GO:0006355
Aip02g01851 252 MobiDBLite consensus disorder prediction 133 177 - -
Aip02g01851 252 Coils Coil 179 199 - -
Aip02g01851 252 Gene3D NAC domain 17 146 IPR036093 GO:0003677|GO:0006355
Aip02g01851 252 ProSiteProfiles NAC domain profile. 8 185 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01851 Aip-Chr2 80465931 80468477 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01851 5 124 NAC Transcription Factor Family AT5G13180 34.167 3.10e-11 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aip02g01851 NAM 7.6e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01851 - - aip:107627432 383.645