Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01848 ATGGTGTCATGTAGCAGAGTGGTTAATGAAATGGGATGCGGTAGTGGTGATGATCCGGATTCGGCCGGTGAAATGCCCAAAATGGCAGGCGACGACGAGGAAAAAATGCTTGACATAGGAATGGAGGAGGATGAGTTTGAGGGTTTTCGATATAACCAGAGTGAATTCATTGCCAACACGAAATCTGATGCATTACCGGTTACTGCGGCGGATGTACTTAAGATGGAGTTTAATAGTCCAGTGGAAGCCACTATTTTCTATGAAGAGTATAGTAGGGTGAAGGGTTTTGCGATACGACAAGGAAAGAAGTTGAAAAATAAGAATGGAATGGAGGAGGATGAGTTTGAGGGTTTTCGATATAACCAGAGTGAATTCATTGCCAACACGAAATCTGATGCATTACCGGTTACTGCGGCGGATGTACTTAAGATGGAGTTTAATAGTCCAGTGGAAGCCACTATTTTCTATGAAGAGTATAGTAGGGTGAAGGGTTTTGCGATACGACAAGGAAAGAAGTTGAAAAATAAGAATGGTGATTTTGTTCGTTACACGTATCTGTGTAATAGACAAGGGTTCAGAGACAAGAAGTGGCTAGAAAAGGTGGATCAGAAGAGGGAGCACAAGGTGGTGACTCGTTGTGGATGTCCTGTGGAGATGCGTATTAAGCCTAAAGGGGACAGTGGGAGATGGTTTGTGTCTCGTTTTGTGGAGGAACATGACCATGAGCTCCTGCCTATGAAGTATGTGGACTATCTACCTACTCACCGTAAGATCTCTGATGTTGATATTGCACACATGGATAATATGAGGCAAGTTGGGATATCAATTCCAAAGATCTATGAGTCTATTGCTGTACAGGCAGGTGGTTTTAATTTTGTTCCATTTACTAAGCGAGATATGTACAACGATGTTAGGCGGCAAAGGGCAATGAAGAATGGTGACGTGAATGCTGCGTTGAGGGTTTTGGAGGGTGTGGCCCGAACGGACGAGAAATTGTATTGGAGGTACGAGGTTGGTGAAGGGCAGCACATGTGCGATCTATTTTGGAGTGATGGGTGA 1059 0.44 MVSCSRVVNEMGCGSGDDPDSAGEMPKMAGDDEEKMLDIGMEEDEFEGFRYNQSEFIANTKSDALPVTAADVLKMEFNSPVEATIFYEEYSRVKGFAIRQGKKLKNKNGMEEDEFEGFRYNQSEFIANTKSDALPVTAADVLKMEFNSPVEATIFYEEYSRVKGFAIRQGKKLKNKNGDFVRYTYLCNRQGFRDKKWLEKVDQKREHKVVTRCGCPVEMRIKPKGDSGRWFVSRFVEEHDHELLPMKYVDYLPTHRKISDVDIAHMDNMRQVGISIPKIYESIAVQAGGFNFVPFTKRDMYNDVRRQRAMKNGDVNAALRVLEGVARTDEKLYWRYEVGEGQHMCDLFWSDG 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01848 352 Pfam FAR1 DNA-binding domain 155 245 IPR004330 -
Aip02g01848 352 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 105 260 - -
Aip02g01848 352 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 32 108 - -
Aip02g01848 352 MobiDBLite consensus disorder prediction 1 26 - -
Aip02g01848 352 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 105 260 - -
Aip02g01848 352 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 32 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01848 Aip-Chr2 80440837 80442155 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip02g01848 FAR1 1.3e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01848 - - adu:107466802 469.929