Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01839 ATGGGATTCTCTATAACTATTCAAGAACAAACACCACAAGAGGATCAAGAAGCAAAGCCTTTCATGGCTTCAAATAGTGGTAGTTTTAAGAGCATCAACTCAAGTACTACACCTACTCAACTTGAACCACTCCATCTACATCATAATCATCATCATCATCATCATAATCAAATACAAGAGCAACAACAACACCAAATTTCCTTCGGAATGATGCCATCTTCTTCTTCTTCATCTATCCCAGGAAACTATCTAAACAGAGATTCCGGAGCTTATGATTTGGGTGAACTGGATCAAGCCTTTTTCATGTATCTTGATGGTCAGCCTGACCCCTCTACTGTTCAAGACCAAAGACAGAACTCATCATCTTCAGGAATGAGGCCACCAACTCTCAACATTTTCCCCTCTCAGCCTATGCACGTAGACCCCCCGCCATCCAATTCCAAGGCTACAACGGAATTGGCTTCTGCCCAAACCAATGGTTCCAAGAGGCCATCAGAGCCGTCCATGGAATCAACCAACCCGCGAAATAATGCCGCTTCTGCTCCTGAACCACCCAAACCTATAAAGCGAGAGAACAACCGCAAGGGCACAACTTCAAGTTCTGAACAAGAGGGACCAAAAACACCAGATCCTAAGACACTAAGAAGACTTGCCCAGAATAGAGAGGCAGCAAGGAAAAGCAGGCTGAGGAAAAAGGCGTATGTTCAGCAGCTAGAAACAAGTAGGATTAAGCTGAATCAGTTGGAACAAGAGTTACAGAGAGCCAGAGCTCAAGGCATTTTCATGGGTGGAAATGCACTTTTGGGAGGAGAACAAGGCCTTCCTCTTCCTATGACTACTATTACCTCAGTGTGCGAACTAAGAGCAGCGGTGCAGGAACACCTGCAGGAGAACGAGCTAAGAATGTACGTTGAAAATTGCTTGGGTCATTATGACCAAGTGATTAATCTGAAGAGCATTGTGGCCAAAACAGACGCATTTCATATTGTTTTTGGAATGTGGAAAACACCAGCTGAACGCTGTTTCATGTGGATCGGTGGCTTCAGGCCTTCTGAACTCATTAAGGTTATTATGGCTCAAATTGAGCCTCTTACGGAGCAACAAATATTAGGGATATGTGGGTTGCAACAAACAACACGTGAGGCAGAAGAAGCTCTATCCCAAGGGCTTGAAGCTCTCAATCAATCACTAACAGAAACCATAACATCAGATTCATTGAGTTCTCCACCAAACATGGTTAATTACATGGGACAAATGGCTGTGGCCATGAGCAAGCTTTCAACTATCGAAGGTTTCCTTAGGCAGGCAGATAATTTGAGGCAGCAAACACTGCACCGTCTGCATCAGATTCTAACAACACGGCAATCCGCAAGGTGTTTGCTGGCAATAGCGGAGTACTTCCATCGCCTTAGAGCTCTCAGTTCTCTTTGGATGTCACGCCCTCGCCAAGAATAA 1455 0.4467 MGFSITIQEQTPQEDQEAKPFMASNSGSFKSINSSTTPTQLEPLHLHHNHHHHHHNQIQEQQQHQISFGMMPSSSSSSIPGNYLNRDSGAYDLGELDQAFFMYLDGQPDPSTVQDQRQNSSSSGMRPPTLNIFPSQPMHVDPPPSNSKATTELASAQTNGSKRPSEPSMESTNPRNNAASAPEPPKPIKRENNRKGTTSSSEQEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLETSRIKLNQLEQELQRARAQGIFMGGNALLGGEQGLPLPMTTITSVCELRAAVQEHLQENELRMYVENCLGHYDQVINLKSIVAKTDAFHIVFGMWKTPAERCFMWIGGFRPSELIKVIMAQIEPLTEQQILGICGLQQTTREAEEALSQGLEALNQSLTETITSDSLSSPPNMVNYMGQMAVAMSKLSTIEGFLRQADNLRQQTLHRLHQILTTRQSARCLLAIAEYFHRLRALSSLWMSRPRQE 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01839 484 MobiDBLite consensus disorder prediction 105 215 - -
Aip02g01839 484 Pfam Seed dormancy control 284 358 IPR025422 GO:0006351|GO:0043565
Aip02g01839 484 PANTHER BZIP TRANSCRIPTION FACTOR TGA10 96 275 - -
Aip02g01839 484 PANTHER BZIP TRANSCRIPTION FACTOR TGA10 284 483 - -
Aip02g01839 484 PANTHER TRANSCRIPTION FACTOR TGA9 96 275 - -
Aip02g01839 484 PANTHER TRANSCRIPTION FACTOR TGA9 284 483 - -
Aip02g01839 484 MobiDBLite consensus disorder prediction 142 179 - -
Aip02g01839 484 ProSiteProfiles DOG1 domain profile. 266 480 IPR025422 GO:0006351|GO:0043565
Aip02g01839 484 MobiDBLite consensus disorder prediction 1 43 - -
Aip02g01839 484 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 215 230 IPR004827 GO:0003700|GO:0006355
Aip02g01839 484 SUPERFAMILY Leucine zipper domain 212 254 IPR046347 GO:0003700|GO:0006355
Aip02g01839 484 Gene3D - 211 260 - -
Aip02g01839 484 MobiDBLite consensus disorder prediction 1 83 - -
Aip02g01839 484 Pfam bZIP transcription factor 212 250 IPR004827 GO:0003700|GO:0006355
Aip02g01839 484 SMART brlzneu 208 300 IPR004827 GO:0003700|GO:0006355
Aip02g01839 484 Coils Coil 231 258 - -
Aip02g01839 484 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 210 254 IPR004827 GO:0003700|GO:0006355
Aip02g01839 484 MobiDBLite consensus disorder prediction 60 83 - -
Aip02g01839 484 CDD bZIP_HBP1b-like 212 264 - -
Aip02g01839 484 MobiDBLite consensus disorder prediction 109 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01839 Aip-Chr2 80345770 80355368 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01839 81 484 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 59.819 8.50e-178 505
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aip02g01839 DOG1 9.4e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01839 K14431 - gmx:100815176 704.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g01839 02 80345770 80355368 Aip02g01839 02 80345770 80355368 ECH
Aip06g00332 06 3872375 3878051 Aip02g01839 02 80345770 80355368 PCT