Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01836 ATGGAAGAATTCCAAGCGTACATCCAACTTTTTCTAATTTGGCTAATCTCCACAATTGTGATTCGAGCTATTCTCACAAGACACCGCAACAATGAAAAGGAGCATCATCAAAATCCACCAAGTCCACCATCACTACCCATCATTGGACACCTTCACTTAATCTCTTCATTACAACATCAAACCTTGCACAATCTCTCAGCCCGCTATGGACCTATCTTTCAAATCTTGCTCGGCTCATTTCCTTGTATAGTAGTTTCTGTGCCAGAAATTGCCAAAGAATTTCTCAAAACTCATGATTCTTCCTTCTCTGGCCGTTTCATCAAGTCGAGCGCAGAATATTATATAACTTATGGTTTAAAGGGGCTGGTACTCACCCCTTACGGAAGCTACTTCAAGTTCATGAAGAAGCTCTGCATGGCAGAGCTTCTTGGCAAAAGAACCCTAGACCAACTTCTTCCTTTAAGACGTGAAGAAATTCTGAGGTTCCTCAAAGTCTTGCAGAAGAAAGGGGAAGCTGGAGAAAAGGTTGATGTTAGTGGTGAAATCATTACTCTCACTAATAATGTCATTTCAAGAATGACAATGAGCGTAAGGTGTTGCGAAGAAGGAGGCGACGGTTTAGTTGACAGTGAAGAGATAAGAAAGATGGTGAAAGACATTATGGAGAATGCTGGAAAGTTTAATAATATTTCAGATTTTATTTGGTTATTTAAGAATTGGGACTTGCACGGGAAAAATAAGAGGGTTAAGGAGATTAGGAAGAGATTTGATTCAATGATAGAAAGAGTCATTAGGGAGCATGAATTGGCCAAGAAGAAAATGAAGGAAGAAGGAGATACAGGTGGGAGAGTGAAGGATCTACTTGATATTTTGTTGGACATACTTGAAGATAATAAGAAAATTGATGAGATACAATTAACTAAAGAGAATATCAAGGCTCTCATCTTGGACATATTTGTGGCAGGAACTGACACATCAGCTACAAACATCGAATGGGCTCTAGCAGAATTGATCAACAACCCGCATGTGATGGAAAAAGCAAGAAAAGAAATCGATTTAATAACTGCGAACAATAGATTAATACAAGAGTCGGATCTCACTAATCTTCCTTACTTACAAGCCATAGTTAAAGAAACACTAAGACTTCACCCTGTACTTCCACTTATAGCAAGACAATCAACCTCTGAGACCTCTGTTAATGTCTGTGGCTATGAAATTGCATCAAAGTCCTTATTATTTATTAATTTATGGTCTATGGGTAGAAACCCCAAGATTTGGGAGAATCCACTTGAGTTTAGGCCTGAGAGGTTCATTGATGATGAAAGACAATTATCAGATTTAAGGGGTCAAAATTTTCAATTATTACCATTTGGGACTGGAAGAAGAGTGTGTCCTGGAGCTTCACTAGCACTTCTAACTGTACCTGCTACTCTTGCTGCCATGATTCAATGCTTTGAATGGAAGGTTGATGGGAATGTTAGTATGGAAGAGCAACCTCACAGTGGCATCACACTTGCTAGGGCTCATCCTTTAATTTGTGTTCCTATACCTCGCTTTCGTCAATTGAGCTATCTTGGAGAAAATTAG 1587 0.3907 MEEFQAYIQLFLIWLISTIVIRAILTRHRNNEKEHHQNPPSPPSLPIIGHLHLISSLQHQTLHNLSARYGPIFQILLGSFPCIVVSVPEIAKEFLKTHDSSFSGRFIKSSAEYYITYGLKGLVLTPYGSYFKFMKKLCMAELLGKRTLDQLLPLRREEILRFLKVLQKKGEAGEKVDVSGEIITLTNNVISRMTMSVRCCEEGGDGLVDSEEIRKMVKDIMENAGKFNNISDFIWLFKNWDLHGKNKRVKEIRKRFDSMIERVIREHELAKKKMKEEGDTGGRVKDLLDILLDILEDNKKIDEIQLTKENIKALILDIFVAGTDTSATNIEWALAELINNPHVMEKARKEIDLITANNRLIQESDLTNLPYLQAIVKETLRLHPVLPLIARQSTSETSVNVCGYEIASKSLLFINLWSMGRNPKIWENPLEFRPERFIDDERQLSDLRGQNFQLLPFGTGRRVCPGASLALLTVPATLAAMIQCFEWKVDGNVSMEEQPHSGITLARAHPLICVPIPRFRQLSYLGEN 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01836 528 Gene3D Cytochrome P450 23 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g01836 528 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g01836 528 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g01836 528 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g01836 528 PRINTS P450 superfamily signature 464 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g01836 528 SUPERFAMILY Cytochrome P450 39 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g01836 528 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
Aip02g01836 528 PANTHER CYTOCHROME P450 FAMILY PROTEIN 4 523 - -
Aip02g01836 528 Coils Coil 344 364 - -
Aip02g01836 528 Pfam Cytochrome P450 39 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g01836 528 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g01836 528 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g01836 528 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g01836 528 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g01836 528 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g01836 528 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g01836 528 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g01836 528 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g01836 528 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01836 Aip-Chr2 80187392 80189886 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01836 1 518 Cytochrome P450 AT5G06900 44.402 1.99e-149 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01836 K24188 - gmx:100805931 630.557