Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01830 ATGTTTAATCTATTGGCAGTGTTACAGAAAGATAATTTCAATCCCAGATTCTATGTTGCTGCTGCTACTGATAATATGAGTTTTCCAAAGGCTCAGTTGCTGGAGAACTCCTTGCTATCCATTGAAGCTGGAGTAGTTGGATTAACTTTAACTGTTGCAAGCACATTTAGCTTTACAGAGCAATCCTGGACTCCAGGTAACCTAATTCAGGCCAAAGATCGTGCTCATAGAATTGGCCAGTGGCCAAAGCTGCACCACAATATCCTCGAGCTACCTATGTTGGCTGTCTCATGGAACTCATCGATAACTTCGTTAACATTTTAG 324 0.4136 MFNLLAVLQKDNFNPRFYVAAATDNMSFPKAQLLENSLLSIEAGVVGLTLTVASTFSFTEQSWTPGNLIQAKDRAHRIGQWPKLHHNILELPMLAVSWNSSITSLTF 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01830 107 Gene3D - 21 86 IPR027417 -
Aip02g01830 107 PANTHER DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER 37 81 - -
Aip02g01830 107 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 82 IPR027417 -
Aip02g01830 107 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A-LIKE PROTEIN 1 37 81 IPR030101 GO:0006281|GO:0031297|GO:0036310
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01830 Aip-Chr2 79989369 79990858 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01830 38 81 RAD5 or RAD16-like Gene Family AT1G05120 50.000 2.76e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01830 K14440 - adu:107484479 73.559