Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01827 ATGGCCTTTGCTTTTGATTTCCAAGGTTACATCCAACTTTTCCTCATCTGGCTTATCTCCACCATTATTGTTCGAGTCATTCTCACAAGAAACCGCAAGAAAAACGGTCACCAAAACTTACTACCAAGTCCACCATCACTACCTATCATCGGACACCTTCACTTAATCTCTTCATTACCACACCAAAGCTTCCATAGCCTCTCATCCCGGTATGGATCCATCATGCAAATCTACCTCGGCTCACTCCCTTGTGTGGTGGTCACCACCCCGGAAATCGCGAAAGAGTTCCTCAAAACACACGAAACTACCTTCATCAATCGTTTCAAAAGCTCTGCCGTTCATTACTTGTCTTACGGCTCAAAGGGTTTCTTGTTTGCGCCTTATGGAAGCTTCTGGAAGTTCATGAAGAAGCTCTGCATGTCAGAGCTTCTCGGTCAACGAACACTCGACCAGCTTCTCCTTTTGAGAAAGCAGGAGACTCTGAGATTCCTCAGAGTCTTACAGAAAAAGGGAGAAGCTGGCGAGGCCATGGATGTTGGTGACCAGCTTTTGTCTCTCACCAACAGCGTAATTTCGAGAATGACCATGAGCGTGACTTGTTGCGAGGAAGGTGGGAACGGTGATGATGCAGAAGTTATGAGGAAGATGGTGAAAGACACTGCTGAGCTTGCTGGAAAGTTTAATGTTTCGGATTTTATTTGGTTGTTCAAGAATTGGGACTTGCAAGGGATGAATAAGAGGCTTAAGGGGATTTTGGAGAGGTTTGATTCGATGATAGAGAGGGTAATAAGGGAGCATGAATTGGCAAGGAAAAAAAGGAAAGAAGAAGGAGAAAGTGATGAAGGTGGAAGAGTGAGGGACTTGCTTGATATTTTGCTGGAAATATATGAAGATAAGAGGAATGACGAGATATATGTGGCGTATATGCAGGACTTATTCATGGCAGGAACAGATACCTCAGCTATCACCATTGAATGGGCTTTTGCTGAGTTAATCAACAACCCACATGTAATGAAAAAAGCAAGACAAGAGATTGATTCAGTAACAAGAAGAAACAGAATAATAGAAGAATCAGATCTTCCAAACCTTCCTTACTTGCGAGCCATAGTTAAAGAAACACTAAGGCTTCATCCTGCGGCACCACTTTTAGGGAGACAATCAACTGAAATCTCTAATGTTTGCGGCTATGAAATTCCATCAAAGTCCTTATTGTTTATTAACCTGTGGTCTATGGGTAGGGACCCTAAGATTTGGGAGAACCCTCTTGAGTTTAGGCCAGAGAGTTTCATTGAAGAAGGACAATTGGATGTGAGGGGACAATATTTTCAACTAATGCCCTTTGGAACTGGAAGAAGAGTGTGCCCTGGAGCTTCACTAGCGCTTCAAATTGTGCCTAGTAATCTTGCTGCCATGATTCAGTGTTTTGAATGGAAGGTTGATGGGATTGTTAGTATGGAAGAGAAACCTGGCATGACAGTTCCAAGAGCTCATCCTTTAATTTGTGTCCCTGTGCCTCGCTTTAGTGTCCTTCCTTCTATTCATTCT 1545 0.4317 MAFAFDFQGYIQLFLIWLISTIIVRVILTRNRKKNGHQNLLPSPPSLPIIGHLHLISSLPHQSFHSLSSRYGSIMQIYLGSLPCVVVTTPEIAKEFLKTHETTFINRFKSSAVHYLSYGSKGFLFAPYGSFWKFMKKLCMSELLGQRTLDQLLLLRKQETLRFLRVLQKKGEAGEAMDVGDQLLSLTNSVISRMTMSVTCCEEGGNGDDAEVMRKMVKDTAELAGKFNVSDFIWLFKNWDLQGMNKRLKGILERFDSMIERVIREHELARKKRKEEGESDEGGRVRDLLDILLEIYEDKRNDEIYVAYMQDLFMAGTDTSAITIEWAFAELINNPHVMKKARQEIDSVTRRNRIIEESDLPNLPYLRAIVKETLRLHPAAPLLGRQSTEISNVCGYEIPSKSLLFINLWSMGRDPKIWENPLEFRPESFIEEGQLDVRGQYFQLMPFGTGRRVCPGASLALQIVPSNLAAMIQCFEWKVDGIVSMEEKPGMTVPRAHPLICVPVPRFSVLPSIHS 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01827 515 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g01827 515 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g01827 515 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g01827 515 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g01827 515 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g01827 515 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g01827 515 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g01827 515 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g01827 515 Gene3D Cytochrome P450 25 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g01827 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Aip02g01827 515 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g01827 515 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g01827 515 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g01827 515 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g01827 515 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 7 511 - -
Aip02g01827 515 Pfam Cytochrome P450 42 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g01827 515 PANTHER CYTOCHROME P450 FAMILY PROTEIN 7 511 - -
Aip02g01827 515 Coils Coil 338 358 - -
Aip02g01827 515 SUPERFAMILY Cytochrome P450 42 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01827 Aip-Chr2 79877832 79882435 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01827 6 506 Cytochrome P450 AT5G06900 45.455 2.38e-158 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01827 K24188 - gmx:100805931 694.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g01827 02 79877832 79882435 Aip02g01827 02 79877832 79882435 ECH
Aip06g00338 06 3906145 3907924 Aip02g01827 02 79877832 79882435 PCT
Aip02g01827 02 79877832 79882435 Aip06g00339 06 3920518 3922367 PCT