Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01813 ATGAGTGTTTGCTTTCCTTTTAGTCAGTCTTCAATAAGTGCTGTTGTCGTGAAGGGTCGTACTCACCTGTTGATGAGCAGTAACATCTGTGGTCTTTGGTCCCAAGGAAAATCCAGTTTATATTCTTCCAGTTTGTGCCCTTCGCAGTCGCAGAAAAATCATGTTGGTCTTTCTTGTTGCGCAAGATCTTCTATGGGCCAAACAATAAGAGGTTACCTTGGATCATGCTGCTCCAAGCAAAGGGGCAACCTTCAAATTTGTAGTTCTATAGCACCTCGGAAGAGGCATCATGAAATTTCATTGGCATGCCAAAGTTTGAATATGAGGCTTTTGGTACCTAACCAAAAGAAGCTTCCCAAAGTTAAGTGTAATGTGGGACCTGTATCTTGGCCACGTGGATGTGCATCAGTTGGCTTGATACTTGGATTACTTGTATGCAATTTAAGCTCTGAACCTGTATATGCTGACACAGATCCTGAAAATGGAAAGAGAAATGACCAAAACGTGTGCAAATCAAATGTAGCGATATCGCATGGGAAGAAAGTCTACACTGACTATTCTGTGATTGGAATACCTGGGGATGGAAGATGTTTATTTCGCTCAGTTGCTCATGGGGCTTGCTTGAGGTCTGGAAAACCTCCTCCTAGTGAAAGCCATCAGAGACAATTGGCAGATGAATTACGCTCCAAAGTTGCTGATGAGTTTATCAAAAGAAGGGAAGAGACAGAATGGTTTATTGAAGGTGATTTTGATACTTATATTTCACAAATAAGGAAGCCTCATGTTTGGGGAGGTGAGCCTGAATTGTTCATTGCTTCACATGTATTGAAGATGCCAATCACAGTGTACATGTATGATAGGGATGCTGGTGGCTTGATATCAATTGCTGAGTATGGCCAGGAATATGGCAAGGAGAATCCAATTAGAGTTCTTTACCATGGATTTGGTCATTATGATGCACTGGAGATCCCTAGAAGGAAGGGTCCTAAACCAAGGCTGTAA 1002 0.4202 MSVCFPFSQSSISAVVVKGRTHLLMSSNICGLWSQGKSSLYSSSLCPSQSQKNHVGLSCCARSSMGQTIRGYLGSCCSKQRGNLQICSSIAPRKRHHEISLACQSLNMRLLVPNQKKLPKVKCNVGPVSWPRGCASVGLILGLLVCNLSSEPVYADTDPENGKRNDQNVCKSNVAISHGKKVYTDYSVIGIPGDGRCLFRSVAHGACLRSGKPPPSESHQRQLADELRSKVADEFIKRREETEWFIEGDFDTYISQIRKPHVWGGEPELFIASHVLKMPITVYMYDRDAGGLISIAEYGQEYGKENPIRVLYHGFGHYDALEIPRRKGPKPRL 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01813 333 ProSiteProfiles OTU domain profile. 186 324 IPR003323 -
Aip02g01813 333 PANTHER OS09G0487700 PROTEIN 13 333 - -
Aip02g01813 333 Pfam OTU-like cysteine protease 192 318 IPR003323 -
Aip02g01813 333 SUPERFAMILY Cysteine proteinases 186 321 IPR038765 -
Aip02g01813 333 PANTHER OTU DOMAIN CONTAINING PROTEIN 13 333 - -
Aip02g01813 333 Gene3D - 171 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01813 Aip-Chr2 79243367 79247291 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01813 - - aip:107625481 672.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g01813 02 79243367 79247291 Aip02g01813 02 79243367 79247291 ECH
Aip02g01813 02 79243367 79247291 Aip06g00526 06 6706430 6709355 PCT