Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01811 ATGACGATCTTCTCCGGTGATATCTCCTCCAGCGACGGTCTTCTCCGGCGACACATTCTCCAGCGGCGATCTCCTTCGGCGACATCTCCTCTGGTCGCGATCTTTTCCGGCGACTTCCCCTCCAGCGACGATATCCTTCAGCTTCCTCCTTGCCGTCCTGTGTCTTCTCCGCCAAAATCCTCATTGCTGATGTTGCTTACAGGAGGAAGGGTTGCCACCAAAGGAAGAACAGTTGAACAGCAAGTTATTGAATCAAATCCAATTTTAGAAGCCTTTGTAAATGCTAAAACTGTGAGGAACAACAATTCGAGTCCGTTTGGTAAATTCGTTGAGATCCAATTTGATAAGAATGGAAGAATCTCAGGAGCAGCCATTAGAACATATCTTCTAGAAAGATCTAGGGTTTGTCAAGTAAATGATCCTGAACGTAATTACCACTACTTCTATCTTCTCTGTGCTGCACTGCAGAAGGAAGTTGAGAAATACAAATTAGGACATCTAAAACATTTCATCACCTTAATCAGATCAGTAAGAAATTTTCAGAATGATAAAACCAAATTCCACCTGAAAACCACTGCTGAGCTTCTCATGTGTGATCTTGCTGGTTTGGAAGATGCATTAGTGAAGTGTGTGATGATCACCAGAGATGGCTTGGCCAAAACAATATATTCTAGACTCTTTGACTGGTTGGTAGACAAGATTAACAATTCGATCGGACAAGACGCAACTTCTAAATGTTTGATTGGAGTCCTTGATATCTATTGCTTTGGAAGCTTTAAAACCAACAGCTTTGAGCAGTTTTGCATTAATTTCACAAATGAGAAGTTGCAGCAACATTTAAGAATCATAAACGCTTCATTAAGCCAAAATTGTCTCAGACAGATTTTACTATTTCTCATTATGCAGGCGAGGTGCAATACTACTGGCCTTTTTCCTCCACTTCCAGAAGAGACATCAAAATCTTCCAAATTTTCTTCAATTGAGTGTTTTAGAAGCAATCAGAATTAG 1008 0.4077 MTIFSGDISSSDGLLRRHILQRRSPSATSPLVAIFSGDFPSSDDILQLPPCRPVSSPPKSSLLMLLTGGRVATKGRTVEQQVIESNPILEAFVNAKTVRNNNSSPFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQVNDPERNYHYFYLLCAALQKEVEKYKLGHLKHFITLIRSVRNFQNDKTKFHLKTTAELLMCDLAGLEDALVKCVMITRDGLAKTIYSRLFDWLVDKINNSIGQDATSKCLIGVLDIYCFGSFKTNSFEQFCINFTNEKLQQHLRIINASLSQNCLRQILLFLIMQARCNTTGLFPPLPEETSKSSKFSSIECFRSNQN 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01811 335 Gene3D Kinesin motor domain 74 142 IPR036961 -
Aip02g01811 335 PANTHER MYOSIN 67 176 - -
Aip02g01811 335 SMART MYSc_2a 34 333 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip02g01811 335 PANTHER MYOSIN 182 280 - -
Aip02g01811 335 Gene3D - 261 280 - -
Aip02g01811 335 Pfam Myosin head (motor domain) 209 280 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip02g01811 335 Pfam Myosin head (motor domain) 72 189 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip02g01811 335 ProSiteProfiles Myosin motor domain profile. 1 335 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip02g01811 335 Gene3D - 143 192 - -
Aip02g01811 335 Gene3D Myosin VI head, motor domain, U50 subdomain 214 240 - -
Aip02g01811 335 Gene3D Kinesin motor domain 241 256 IPR036961 -
Aip02g01811 335 PANTHER MYOSIN-9 67 176 - -
Aip02g01811 335 PANTHER MYOSIN-9 182 280 - -
Aip02g01811 335 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 73 290 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01811 Aip-Chr2 79059750 79062151 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01811 64 280 Myosins gene family AT1G04160 53.265 7.34e-87 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01811 K10357 - bna:106353578 308.916