Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip02g01769 | ATGGAGAAGATTTCACTAACAACAACTGCTCATAACTGTTTTTTCACTTCTACACTTCCAAAGACATCTTCTTTCTCTTCTTCTCTATTCGCCTCTAACCAGCTTCTTGGTCTTCCCTTATCTTCTTCTTCTTCTTCTGCGTCCACCAATCCTCGCCTCAGACTTGTTTCTAGAAACGCCGCTTCTTGCAGGACCGTCAAATGCTCTGTTTCTGAAGCCGCTGAACCCCTAACTGCTTCAGAGAAGAGGCAATTGAAGAGAAGAGGGGATGTAAGGAACATAGCAATTGTTGCTCATGTTGATCATGGAAAAACAACTCTAGTTGATGCCATGTTGAAACAGACAAAGGTGTTTCGTGATAATCAATTTGTGCAGGAAAGGATAATGGACTCAAATGATTTGGAGCGTGAGAGAGGAATCACAATATTGAGTAAAAATACATCCGTCTCCTATCATGACACAAAGATTAATATAATAGATACTCCCGGTCACTCTGATTTTGGAGGTGAAGTAGAGCGTATCCTGAACATGGTGGAAGGAATCCTTCTAGTGGTAGATTCTGTTGAAGGACCAATGCCACAGACAAGATTTGTCTTAAAGAAAGCATTAGAGTTTGGTCATTCAGTTGTCGTGGTTGTTAATAAGATAGACAGGCCATCTGCTCGCCCAGATTTTGTTGTCAATTCAACTTTTGAACTCTTCATTGAATTAAATGCAACAGATGAGCAGTGCGACTTTCAAGTAATATATGCAAGTGGTATAAAAGGACAAGCAGGGTTGTCTCCTGAGAATCTGGCAGAAGACCTTGGGCCATTGTTTGAGTCCATCATCAGATGCATCCCAGGACCAAGGATTGATAAAGATGGCGCTCTTCAAATGCTTGTCACAAATATTGAGTATGATGAACACAAAGGGCGTATAGCAATTGGGCGCTTGCAAGCTGGAGTTTTGGAAAAAGGCATGGATGTCAAGGTATGCACATCAGAAGATTCATGTAGATATGGAAGAGTTAGTGAGCTTTACGTGTATGATAAATTCAGTAGGGTCCCTGCAGAAAGTGTGGAGGCTGGTGATATATGTGCAGTATGCGGAATTGGTGATATTCAGATTGGAGAGACAATTGCTTGTAAAGTATCTGGAAAGCCACTACCTTCCATAAAGGTGGAGGAACCAACTGTGAAAATGGCTTTCTCCATAAACACTTCCCCTTTTGTTGGCCGCGAGGGAAAGTATGTTACCAGTAGGAACTTAAGGGACAGGCTTTATCGTGAACTTGAGCGAAATCTCGCCATGAAAGTTGAAGATGGTGAAACAGCAGATACATTCATTGTCAGTGGGCGTGGAACTTTGCATATCACCATACTGATTGAAAATATGCGAAGAGAAGGATATGAATTCATGGTTGGCCCTCCTAAAGTTATCAACAAGAAAGTTAACGACAAATTGCTTGAACCATATGAGATTGCAACTGTTGAGGTACCTGAAGAACATATGGGAGCTGTTGTTGAACTCCTTGGGAAGAGACGAGGGCAGATGTTTGATATGCAAGGAGTTGGATCGGAGGGAACTACATTACTCAAATACAAGATCCCAACTCGTGGCCTCCTTGGATTACGGAATGCAATTTTAACTGCTTCCCGAGGGACAGCTATTCTCAATACTATCTTTGATAGCTATGGACCCTGGGCTGGTGACATGAGTACCCGGGATCAAGGCTCACTGGTTGCTTTTGAGGATGGAACAAGTTCTTCTTATGCAATCGCTAGTTCACAGGAAAGGGGACAGATGTTTATTGGTCCTGGAGTGGATGTTTATAAAGGTCAAATTGTTGGCATCCATCAGCGACCTGGGGACTTGTCATTGAATGTTTGCAAGAAAAAGGCTGCAACAAACATACGTTCCAACAAGGAACAAACAGTGATTCTTGATACCCCCTTGGATTATAGTCTTGATGACTGCATCGAGTACATACAAGAAGATGAACTAGTAGAGGTTACTCCCCAAAGTATTCGAATGTGCAAGAATCCAAAGCTTCAGAAGAAAACAAGGTAG | 2052 | 0.422 | MEKISLTTTAHNCFFTSTLPKTSSFSSSLFASNQLLGLPLSSSSSSASTNPRLRLVSRNAASCRTVKCSVSEAAEPLTASEKRQLKRRGDVRNIAIVAHVDHGKTTLVDAMLKQTKVFRDNQFVQERIMDSNDLERERGITILSKNTSVSYHDTKINIIDTPGHSDFGGEVERILNMVEGILLVVDSVEGPMPQTRFVLKKALEFGHSVVVVVNKIDRPSARPDFVVNSTFELFIELNATDEQCDFQVIYASGIKGQAGLSPENLAEDLGPLFESIIRCIPGPRIDKDGALQMLVTNIEYDEHKGRIAIGRLQAGVLEKGMDVKVCTSEDSCRYGRVSELYVYDKFSRVPAESVEAGDICAVCGIGDIQIGETIACKVSGKPLPSIKVEEPTVKMAFSINTSPFVGREGKYVTSRNLRDRLYRELERNLAMKVEDGETADTFIVSGRGTLHITILIENMRREGYEFMVGPPKVINKKVNDKLLEPYEIATVEVPEEHMGAVVELLGKRRGQMFDMQGVGSEGTTLLKYKIPTRGLLGLRNAILTASRGTAILNTIFDSYGPWAGDMSTRDQGSLVAFEDGTSSSYAIASSQERGQMFIGPGVDVYKGQIVGIHQRPGDLSLNVCKKKAATNIRSNKEQTVILDTPLDYSLDDCIEYIQEDELVEVTPQSIRMCKNPKLQKKTR | 683 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip02g01769 | 683 | Gene3D | Translation factors | 285 | 385 | - | - | |
Aip02g01769 | 683 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 82 | 291 | IPR027417 | - | |
Aip02g01769 | 683 | CDD | TypA_BipA | 90 | 283 | - | - | |
Aip02g01769 | 683 | CDD | BipA_TypA_II | 291 | 384 | - | - | |
Aip02g01769 | 683 | Gene3D | - | 89 | 284 | IPR027417 | - | |
Aip02g01769 | 683 | SUPERFAMILY | EF-G C-terminal domain-like | 484 | 599 | IPR035647 | - | |
Aip02g01769 | 683 | Pfam | Elongation factor Tu GTP binding domain | 91 | 281 | IPR000795 | GO:0003924|GO:0005525 | |
Aip02g01769 | 683 | PANTHER | TRANSLATION ELONGATION FACTOR-RELATED | 75 | 683 | - | - | |
Aip02g01769 | 683 | SUPERFAMILY | Translation proteins | 237 | 377 | IPR009000 | - | |
Aip02g01769 | 683 | TIGRFAM | TypA_BipA: GTP-binding protein TypA/BipA | 91 | 680 | IPR006298 | GO:0005525 | |
Aip02g01769 | 683 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 89 | 284 | IPR000795 | GO:0003924|GO:0005525 | |
Aip02g01769 | 683 | Gene3D | Elongation Factor G (Translational Gtpase), domain 3 | 392 | 675 | - | - | |
Aip02g01769 | 683 | CDD | BipA_TypA_C | 484 | 563 | IPR035651 | - | |
Aip02g01769 | 683 | Pfam | Elongation factor Tu domain 2 | 305 | 374 | IPR004161 | GO:0005525 | |
Aip02g01769 | 683 | ProSitePatterns | Translational (tr)-type guanine nucleotide-binding (G) domain signature. | 130 | 145 | IPR031157 | - | |
Aip02g01769 | 683 | SMART | EFG_C_a | 481 | 570 | IPR000640 | - | |
Aip02g01769 | 683 | Pfam | Elongation factor G C-terminus | 482 | 566 | IPR000640 | - | |
Aip02g01769 | 683 | Gene3D | - | 475 | 568 | - | - | |
Aip02g01769 | 683 | Gene3D | bipa protein | 569 | 676 | IPR042116 | - | |
Aip02g01769 | 683 | TIGRFAM | small_GTP: small GTP-binding protein domain | 92 | 240 | IPR005225 | GO:0005525 | |
Aip02g01769 | 683 | SUPERFAMILY | EF-G C-terminal domain-like | 389 | 473 | IPR035647 | - | |
Aip02g01769 | 683 | CDD | BipA_III | 391 | 469 | - | - | |
Aip02g01769 | 683 | PRINTS | GTP-binding elongation factor signature | 93 | 106 | IPR000795 | GO:0003924|GO:0005525 | |
Aip02g01769 | 683 | PRINTS | GTP-binding elongation factor signature | 137 | 145 | IPR000795 | GO:0003924|GO:0005525 | |
Aip02g01769 | 683 | PRINTS | GTP-binding elongation factor signature | 157 | 167 | IPR000795 | GO:0003924|GO:0005525 | |
Aip02g01769 | 683 | PRINTS | GTP-binding elongation factor signature | 209 | 218 | IPR000795 | GO:0003924|GO:0005525 | |
Aip02g01769 | 683 | PANTHER | BNAC09G43450D PROTEIN | 75 | 683 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip02g01769 | Aip-Chr2 | 76767982 | 76777440 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip02g01769 | 91 | 218 | Eukaryotic Initiation Factors Gene Family | AT3G22980 | 43.846 | 3.27e-23 | 103 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip02g01769 | K06207 | - | gmx:100785222 | 1162.9 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aip02g01769 | 02 | 76767982 | 76777440 | Aip02g01769 | 02 | 76767982 | 76777440 | ECH |