Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01769 ATGGAGAAGATTTCACTAACAACAACTGCTCATAACTGTTTTTTCACTTCTACACTTCCAAAGACATCTTCTTTCTCTTCTTCTCTATTCGCCTCTAACCAGCTTCTTGGTCTTCCCTTATCTTCTTCTTCTTCTTCTGCGTCCACCAATCCTCGCCTCAGACTTGTTTCTAGAAACGCCGCTTCTTGCAGGACCGTCAAATGCTCTGTTTCTGAAGCCGCTGAACCCCTAACTGCTTCAGAGAAGAGGCAATTGAAGAGAAGAGGGGATGTAAGGAACATAGCAATTGTTGCTCATGTTGATCATGGAAAAACAACTCTAGTTGATGCCATGTTGAAACAGACAAAGGTGTTTCGTGATAATCAATTTGTGCAGGAAAGGATAATGGACTCAAATGATTTGGAGCGTGAGAGAGGAATCACAATATTGAGTAAAAATACATCCGTCTCCTATCATGACACAAAGATTAATATAATAGATACTCCCGGTCACTCTGATTTTGGAGGTGAAGTAGAGCGTATCCTGAACATGGTGGAAGGAATCCTTCTAGTGGTAGATTCTGTTGAAGGACCAATGCCACAGACAAGATTTGTCTTAAAGAAAGCATTAGAGTTTGGTCATTCAGTTGTCGTGGTTGTTAATAAGATAGACAGGCCATCTGCTCGCCCAGATTTTGTTGTCAATTCAACTTTTGAACTCTTCATTGAATTAAATGCAACAGATGAGCAGTGCGACTTTCAAGTAATATATGCAAGTGGTATAAAAGGACAAGCAGGGTTGTCTCCTGAGAATCTGGCAGAAGACCTTGGGCCATTGTTTGAGTCCATCATCAGATGCATCCCAGGACCAAGGATTGATAAAGATGGCGCTCTTCAAATGCTTGTCACAAATATTGAGTATGATGAACACAAAGGGCGTATAGCAATTGGGCGCTTGCAAGCTGGAGTTTTGGAAAAAGGCATGGATGTCAAGGTATGCACATCAGAAGATTCATGTAGATATGGAAGAGTTAGTGAGCTTTACGTGTATGATAAATTCAGTAGGGTCCCTGCAGAAAGTGTGGAGGCTGGTGATATATGTGCAGTATGCGGAATTGGTGATATTCAGATTGGAGAGACAATTGCTTGTAAAGTATCTGGAAAGCCACTACCTTCCATAAAGGTGGAGGAACCAACTGTGAAAATGGCTTTCTCCATAAACACTTCCCCTTTTGTTGGCCGCGAGGGAAAGTATGTTACCAGTAGGAACTTAAGGGACAGGCTTTATCGTGAACTTGAGCGAAATCTCGCCATGAAAGTTGAAGATGGTGAAACAGCAGATACATTCATTGTCAGTGGGCGTGGAACTTTGCATATCACCATACTGATTGAAAATATGCGAAGAGAAGGATATGAATTCATGGTTGGCCCTCCTAAAGTTATCAACAAGAAAGTTAACGACAAATTGCTTGAACCATATGAGATTGCAACTGTTGAGGTACCTGAAGAACATATGGGAGCTGTTGTTGAACTCCTTGGGAAGAGACGAGGGCAGATGTTTGATATGCAAGGAGTTGGATCGGAGGGAACTACATTACTCAAATACAAGATCCCAACTCGTGGCCTCCTTGGATTACGGAATGCAATTTTAACTGCTTCCCGAGGGACAGCTATTCTCAATACTATCTTTGATAGCTATGGACCCTGGGCTGGTGACATGAGTACCCGGGATCAAGGCTCACTGGTTGCTTTTGAGGATGGAACAAGTTCTTCTTATGCAATCGCTAGTTCACAGGAAAGGGGACAGATGTTTATTGGTCCTGGAGTGGATGTTTATAAAGGTCAAATTGTTGGCATCCATCAGCGACCTGGGGACTTGTCATTGAATGTTTGCAAGAAAAAGGCTGCAACAAACATACGTTCCAACAAGGAACAAACAGTGATTCTTGATACCCCCTTGGATTATAGTCTTGATGACTGCATCGAGTACATACAAGAAGATGAACTAGTAGAGGTTACTCCCCAAAGTATTCGAATGTGCAAGAATCCAAAGCTTCAGAAGAAAACAAGGTAG 2052 0.422 MEKISLTTTAHNCFFTSTLPKTSSFSSSLFASNQLLGLPLSSSSSSASTNPRLRLVSRNAASCRTVKCSVSEAAEPLTASEKRQLKRRGDVRNIAIVAHVDHGKTTLVDAMLKQTKVFRDNQFVQERIMDSNDLERERGITILSKNTSVSYHDTKINIIDTPGHSDFGGEVERILNMVEGILLVVDSVEGPMPQTRFVLKKALEFGHSVVVVVNKIDRPSARPDFVVNSTFELFIELNATDEQCDFQVIYASGIKGQAGLSPENLAEDLGPLFESIIRCIPGPRIDKDGALQMLVTNIEYDEHKGRIAIGRLQAGVLEKGMDVKVCTSEDSCRYGRVSELYVYDKFSRVPAESVEAGDICAVCGIGDIQIGETIACKVSGKPLPSIKVEEPTVKMAFSINTSPFVGREGKYVTSRNLRDRLYRELERNLAMKVEDGETADTFIVSGRGTLHITILIENMRREGYEFMVGPPKVINKKVNDKLLEPYEIATVEVPEEHMGAVVELLGKRRGQMFDMQGVGSEGTTLLKYKIPTRGLLGLRNAILTASRGTAILNTIFDSYGPWAGDMSTRDQGSLVAFEDGTSSSYAIASSQERGQMFIGPGVDVYKGQIVGIHQRPGDLSLNVCKKKAATNIRSNKEQTVILDTPLDYSLDDCIEYIQEDELVEVTPQSIRMCKNPKLQKKTR 683
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01769 683 Gene3D Translation factors 285 385 - -
Aip02g01769 683 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 82 291 IPR027417 -
Aip02g01769 683 CDD TypA_BipA 90 283 - -
Aip02g01769 683 CDD BipA_TypA_II 291 384 - -
Aip02g01769 683 Gene3D - 89 284 IPR027417 -
Aip02g01769 683 SUPERFAMILY EF-G C-terminal domain-like 484 599 IPR035647 -
Aip02g01769 683 Pfam Elongation factor Tu GTP binding domain 91 281 IPR000795 GO:0003924|GO:0005525
Aip02g01769 683 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 75 683 - -
Aip02g01769 683 SUPERFAMILY Translation proteins 237 377 IPR009000 -
Aip02g01769 683 TIGRFAM TypA_BipA: GTP-binding protein TypA/BipA 91 680 IPR006298 GO:0005525
Aip02g01769 683 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 89 284 IPR000795 GO:0003924|GO:0005525
Aip02g01769 683 Gene3D Elongation Factor G (Translational Gtpase), domain 3 392 675 - -
Aip02g01769 683 CDD BipA_TypA_C 484 563 IPR035651 -
Aip02g01769 683 Pfam Elongation factor Tu domain 2 305 374 IPR004161 GO:0005525
Aip02g01769 683 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 130 145 IPR031157 -
Aip02g01769 683 SMART EFG_C_a 481 570 IPR000640 -
Aip02g01769 683 Pfam Elongation factor G C-terminus 482 566 IPR000640 -
Aip02g01769 683 Gene3D - 475 568 - -
Aip02g01769 683 Gene3D bipa protein 569 676 IPR042116 -
Aip02g01769 683 TIGRFAM small_GTP: small GTP-binding protein domain 92 240 IPR005225 GO:0005525
Aip02g01769 683 SUPERFAMILY EF-G C-terminal domain-like 389 473 IPR035647 -
Aip02g01769 683 CDD BipA_III 391 469 - -
Aip02g01769 683 PRINTS GTP-binding elongation factor signature 93 106 IPR000795 GO:0003924|GO:0005525
Aip02g01769 683 PRINTS GTP-binding elongation factor signature 137 145 IPR000795 GO:0003924|GO:0005525
Aip02g01769 683 PRINTS GTP-binding elongation factor signature 157 167 IPR000795 GO:0003924|GO:0005525
Aip02g01769 683 PRINTS GTP-binding elongation factor signature 209 218 IPR000795 GO:0003924|GO:0005525
Aip02g01769 683 PANTHER BNAC09G43450D PROTEIN 75 683 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aip02g01769 Aip-Chr2 76767982 76777440 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01769 91 218 Eukaryotic Initiation Factors Gene Family AT3G22980 43.846 3.27e-23 103
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01769 K06207 - gmx:100785222 1162.9
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g01769 02 76767982 76777440 Aip02g01769 02 76767982 76777440 ECH