Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01764 ATGGCAGCACAAAATTCGGATGCATGTCCTTCTAAATCCTCTAGCATCTCTGAAGGGAGTGGTAATAACACCAACAATACGAGGGACAATGATTTGGCAACCGAACTGGTGGACCAAGCCTCCAATTCGAGAACGATGTTGGCATTTGTAAAGCTCTCGAACGATGATTCATCGCTTCGTTGTTCTTCGAAAGTGCAGGAGCTCGATTTTTTCAACCCGGGAAAGAGGGTGACGAAAGAATCCTCGCCTTCTTTGGCTAACAACATTGATGAAGGAAAGAATAAAAACACCGAGGAGAAGACTACTTCAGAGTCTAGAACCTTCTCTTGTAACTTCTGTAACAGAAATTTCTCGTCTTCGCAAGCCCTAGGAGGGCACCAAAACGCACACAAACAGGAGCGCGCCATAGCGAAACGTCGCCAAGCAATCGACGCATCTGGCTTTGGTCACCCTCACTTTCCTTATTATTCTACTTACCCTAGCTTGACCTCTCACCCTTTATATAATAGGGCACTTGGGGTAAGGATCGACTCCATGATTCACAAACCTAATTCTTATCCTTGGTCTCGTCTTAGGTTTGATCATAATAACCATAATTGGTCACGGTCAGGGATGCTTGAGGGATTGCAACTAAATGGAGGAGGTTCTTCAAATTTGAATTTGTTTAGAGAAGATGATAACGGTGGCAGTAGAACTATTCCCCTATTAGGAGTTTCTTCTACAAATGTTGCTTCTACTTCTAATTCAGCCATCAATAACAACCCAACAAGGATTGATGATACTCATGATCAGAATCCAAAGCCAGATGAACCTTCCACTACTATGTCTCCAAGCCTTGATTTGTCGCTTAAGCTTTAA 858 0.4324 MAAQNSDACPSKSSSISEGSGNNTNNTRDNDLATELVDQASNSRTMLAFVKLSNDDSSLRCSSKVQELDFFNPGKRVTKESSPSLANNIDEGKNKNTEEKTTSESRTFSCNFCNRNFSSSQALGGHQNAHKQERAIAKRRQAIDASGFGHPHFPYYSTYPSLTSHPLYNRALGVRIDSMIHKPNSYPWSRLRFDHNNHNWSRSGMLEGLQLNGGGSSNLNLFREDDNGGSRTIPLLGVSSTNVASTSNSAINNNPTRIDDTHDQNPKPDEPSTTMSPSLDLSLKL 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01764 285 MobiDBLite consensus disorder prediction 243 259 - -
Aip02g01764 285 MobiDBLite consensus disorder prediction 1 30 - -
Aip02g01764 285 PANTHER AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN, PUTATIVE-RELATED 6 285 - -
Aip02g01764 285 MobiDBLite consensus disorder prediction 243 285 - -
Aip02g01764 285 MobiDBLite consensus disorder prediction 77 91 - -
Aip02g01764 285 ProSiteProfiles Zinc finger C2H2 type domain profile. 108 135 IPR013087 -
Aip02g01764 285 ProSitePatterns Zinc finger C2H2 type domain signature. 110 130 IPR013087 -
Aip02g01764 285 MobiDBLite consensus disorder prediction 74 103 - -
Aip02g01764 285 PANTHER ZINC FINGER PROTEIN JAGGED 6 285 IPR045320 GO:0003700
Aip02g01764 285 Gene3D Classic Zinc Finger 87 147 - -
Aip02g01764 285 MobiDBLite consensus disorder prediction 268 285 - -
Aip02g01764 285 SUPERFAMILY beta-beta-alpha zinc fingers 105 135 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01764 Aip-Chr2 76639522 76640379 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01764 85 194 C2H2 Transcription Factor Family AT5G25160 45.968 1.07e-24 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aip02g01764 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01764 - - adu:107474629 519.235