Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01755 ATGATGGATGAACAGTATGAATCCAAACAAGATTTTGGAGATGAATTTATTGAGGGAGTGTATTTTTCTGAAACTAATCAGTCAAAGGATATCCTTGAAGCTGCTTTTGCAGTTAACTCTATTGCTATGTTGTCTGTCCATAGAAAAATGTCAGAGGCAGATATTATGCAAATGATGAACATGCTAAAGTTCGGGATTAGCACTTCACAGATATTTGGTCTTCTAGCTAGTCAAGCAGGCAGAAATCGTGAGAAGCTTATAGTTTCACATGCCGGTGGAAGTAAAAGCAATGCTAGAAGAGCAACTCAGATGGAGAAAAAATTGGGAAGGCCTGTATGTCGAAGCAAGGTTATTATATCAACTTTGCTAAAGAAAGATGGGAGTTATGTAAGCGGGGAAGGACAACGATTAGCTGAAAAAATAGCAGAGCATTTGCCTGAAGATCAAGAGCATGCTGCCACTGAAGGTATTCATTCAAAAGTCTTGGCTCATCCGGATGATGCAATTGGAAAAGTTTGCGGTCCTGAGAATGGTAAGCGAGTACGTGGCTTTAGTAATGCTGCATGTCCCAGTGGTTTTGGTAAGTCAAAGCACATCTTTGGAGGGGCAATATGCAGAGATTCTAGCAGTGTGCAGCGATTCCATGAGCAGGCACTAGTTCCGGAACTTAAACTATCGTTTGAGCAACAGCACTCTCCAGCGACTGAAATCGGAAACGACGATCTGTGTGACGATCTTCTCCAGCGCTGCTCCGGTGACGATCCTCTCAGCGGCGTTCTCCGACAAATCGATGCTTTCAAAACGGTGATTCTGAATCGAGGAGTTAGGGTTTTGATTGAGAGCGATGGGGAGAGGGAATATCACAATAAGGAGGTTCGACAATTCCACGAGCAGGCAAGTGACATTCTTGAAGCGAAGGAACGGTTTGTTGAAGAAGGCGAAGGAGCTTCAATTTTGTGCGATGCTGAGGGTCTTTCTGAGGAAGAAGTAAGAGCTGCTGCAGCTTGTGCAGGGGAGGAAGTAATGATTAGAAATCGTTTTCTGGAGATGAATGCTCCTAAGGACAGTTCATCTGTCAACAAGTATTACAACCTTGCTCATGCTGTGAGTGAAACTGTAATTAGGCAACCATCAATGTTACATGTTAGAACATTGAGAGACTATCAACTTGTTATGGCATTGATTGCATACTTGATGGAATTTAAAGGAAACTATGACCCGCATCTTATAATAGTACCGAATGTTGTTTTAGTTAACTGGAAGAGCGAGTTTTATAATTGGCTACCATCTGTGTCGTGCATTTTTTATGTTGGAAGCAAGGATCAATGGTCAAAATTGTTTTCACAAGAGGTTTGTGCTATGAAGTTTAATGTCCTTGTGAATACTTATAAGTTCATCATGTATGATCGATCAAAGCTTTCAAAGGCGCCTGCTTTTGACAGGAACACCATTACAGGTCCTGCTCCAACCCAAAATGGGGAGGATGATTGGCTTGAGACTGAGAAGAAAGTTATCATTATCCACCGACTTCATCAGATTCTTGAGCCTTTCATGCTCAGATGTTGTGTTGAAGATGTTGAAGGCTCACTTCCACCTAAGGTGCGACTAAAATAG 1614 0.4207 MMDEQYESKQDFGDEFIEGVYFSETNQSKDILEAAFAVNSIAMLSVHRKMSEADIMQMMNMLKFGISTSQIFGLLASQAGRNREKLIVSHAGGSKSNARRATQMEKKLGRPVCRSKVIISTLLKKDGSYVSGEGQRLAEKIAEHLPEDQEHAATEGIHSKVLAHPDDAIGKVCGPENGKRVRGFSNAACPSGFGKSKHIFGGAICRDSSSVQRFHEQALVPELKLSFEQQHSPATEIGNDDLCDDLLQRCSGDDPLSGVLRQIDAFKTVILNRGVRVLIESDGEREYHNKEVRQFHEQASDILEAKERFVEEGEGASILCDAEGLSEEEVRAAAACAGEEVMIRNRFLEMNAPKDSSSVNKYYNLAHAVSETVIRQPSMLHVRTLRDYQLVMALIAYLMEFKGNYDPHLIIVPNVVLVNWKSEFYNWLPSVSCIFYVGSKDQWSKLFSQEVCAMKFNVLVNTYKFIMYDRSKLSKAPAFDRNTITGPAPTQNGEDDWLETEKKVIIIHRLHQILEPFMLRCCVEDVEGSLPPKVRLK 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01755 537 PANTHER SNF2/RAD54 HELICASE FAMILY 391 475 - -
Aip02g01755 537 PANTHER SNF2/RAD54 HELICASE FAMILY 312 391 - -
Aip02g01755 537 PANTHER SNF2/RAD54 HELICASE FAMILY 488 534 - -
Aip02g01755 537 Pfam Plant transposase (Ptta/En/Spm family) 78 184 IPR004252 -
Aip02g01755 537 Pfam SNF2-related domain 392 467 IPR000330 GO:0005524|GO:0140658
Aip02g01755 537 Gene3D - 390 484 IPR038718 -
Aip02g01755 537 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 381 476 IPR027417 -
Aip02g01755 537 PANTHER ATP-DEPENDENT HELICASE BRM 391 475 IPR031056 GO:0006338|GO:0006355|GO:0008094|GO:0040029
Aip02g01755 537 PANTHER ATP-DEPENDENT HELICASE BRM 312 391 IPR031056 GO:0006338|GO:0006355|GO:0008094|GO:0040029
Aip02g01755 537 PANTHER ATP-DEPENDENT HELICASE BRM 488 534 IPR031056 GO:0006338|GO:0006355|GO:0008094|GO:0040029
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01755 Aip-Chr2 76231831 76242690 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Aip02g01755 SNF2_N 5.5e-07 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01755 - - gmx:100793092 274.248