Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01732 ATGCAATCTTCGTCATCGTGGAGTGCTAAGGACAACAAAGCCTTTGAGAGGGCTCTGGCTGTTTACGACAAGGACACCCCTGACCGATGGTACAACATTGCCCGCGCCGTTGGCGGGAAAACCCCGGAGGATGTGAAGCGGCACTATGAGCGTCTTGTTCACGACGTTAGGCACATTGAGTCAGGGCAAGTGCCATACCCAAATTACAAGAAGAGTGGAGAGAAACCTGATGCTCCGTTCCATTCATTAATTGGCATAAGAAAGAAAGAAATTGAAGCAGCAATAACCAAGGATGAGCTTCAGCACCTCGCTTTGCTGTTCAAATCTGAATTTGATTCAATTGGTCAAATCACTGCTGGAGTTTTGCGGCTGCTTAAGCTGGAAGGTTCTGTTGGTCAAGCTATAATAGATCAACTTGGTAACCTAGGCTATCTTTAA 438 0.4658 MQSSSSWSAKDNKAFERALAVYDKDTPDRWYNIARAVGGKTPEDVKRHYERLVHDVRHIESGQVPYPNYKKSGEKPDAPFHSLIGIRKKEIEAAITKDELQHLALLFKSEFDSIGQITAGVLRLLKLEGSVGQAIIDQLGNLGYL 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01732 145 SMART sant 3 55 IPR001005 -
Aip02g01732 145 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 75 IPR044636 GO:0003700
Aip02g01732 145 Pfam Myb-like DNA-binding domain 5 51 IPR001005 -
Aip02g01732 145 CDD SANT 6 53 IPR001005 -
Aip02g01732 145 ProSiteProfiles SANT domain profile. 2 57 IPR017884 -
Aip02g01732 145 PANTHER TRANSCRIPTION FACTOR MYB/SANT FAMILY-RELATED 1 75 - -
Aip02g01732 145 SUPERFAMILY Homeodomain-like 5 61 IPR009057 -
Aip02g01732 145 ProSiteProfiles Myb-like domain profile. 1 53 IPR001005 -
Aip02g01732 145 Gene3D - 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01732 Aip-Chr2 74932673 74940041 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aip02g01732 Myb_DNA-binding 2e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01732 - - ahf:112719426 156.762