Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01722 ATGGCTTCAAAGGAACTAAAATCGCAATTGGCCTCTTACTGTTCCGAACTGCAATATCTTGCAAACTCGGTAACTAGCCATGTCCAGAATGTTGAGCAGCATAACCAAGATGTGAACTCTCTTGGTTTGATTTTAGCTAGGAAAACAAATGAAGCTGTTGAGATTCTCAAACTTATGTCATCGACCTACTTGATTGCACTTTGCCAAGCCATTGATTTGAGGCATTTGGAGGAGAATTTGAAGAACAACGTGAAGAACACTGTGAGCCAAGTTGCCAAGAGGACACTAACCACTAGCATCAACGGCGAActccacttcttcttaagcttgatggtactcagttggatgccatag 354 0.3672 MASKELKSQLASYCSELQYLANSVTSHVQNVEQHNQDVNSLGLILARKTNEAVEILKLMSSTYLIALCQAIDLRHLEENLKNNVKNTVSQVAKRTLTTSINGELHFFLSLMVLSWMP 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01722 117 Pfam Aromatic amino acid lyase 8 87 IPR001106 -
Aip02g01722 117 Gene3D Fumarase/aspartase (Central domain) 2 108 - -
Aip02g01722 117 PANTHER PHENYLALANINE AMMONIA-LYASE 9 105 - -
Aip02g01722 117 SUPERFAMILY L-aspartase-like 9 107 IPR008948 GO:0003824
Aip02g01722 117 PANTHER HISTIDINE AMMONIA-LYASE 9 105 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01722 Aip-Chr2 74386125 74386478 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01722 10 105 Monolignol Biosynthesis Gene Families AT2G37040 79.167 4.06e-50 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01722 K10775 - ahf:112757855 179.489