Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01679 ATGCAATATCAATCACTTGTGTACAGTAATGCTTCTAATAGCAATGAGCAACATGGCATGGAGATCAATTCTGCTCGTGTTGCAGCAGAGGAAGATGTGGCAAAGAACAGCAAGGATCTCTTTGAGCAGTTTGATGAGAAGGGTCTTCCACAATACAAAGCAGCACCTTTGTTTAATAAGCTTGTGTTTGATAAGGAAAAGATACTAATGCTACTTATATGGGAAAGAAGGTTTATCTTTGGCGACTTCGAAAGAGAGCAACAATTACTATCTGTAAGACCTCCAACGCCTCTCGAGCAACCAAAACCAGCCCCTGTTGTCCCTCCTAGAGCTGCTTCTCCAAGGGCTCCTTCTCCGAGGGCTCCATCTCCAAGAGCTGCGTCTCTGAAGGCTCCTTCTCTGCATGCTACCTCTCCCAAAGCTACTTCTTCCAGGGTTGTTCATCACCACAAGGAGGTTCAAGCAAACTCAGATCAGGCTATGGTTTGGAATCAGCTCAAAGCAAGATCCTTCCAGTTCAATGAAGAAATGATGGAGTCGCTTTTTGGATATAATGCTGCTCAAGAAAAATCTAAACCCGGAATGAAGAAAGAATCTCGTGAACAAACTCCTCAATATATTCAGATCATTGAACCAAAGAAAGCAAAGAATTTGTCAATTCTGTTGAAAGCATTGAATGTAACACTAGAAGAAGTTCGTGATGCACTCCTTGAAGGAAATGAAATACCCCCAGAATTCCTAAACACTTTGTTGAATATGGCACCAAATTGGGCATCTGAAGCGGTTGAGCATCATTACATGAATGCAAGTGATCTCAACTTGTTGGAGGCACATGAAGCTGAAGCGTCCTTAGCTGGAAGGGGTGCCTACACTCTTATGGTAGGACTCACCCTTATTCAAACTGCTGCCGCTAAAGTAGCAGAGTATAAAGCACACGTCTCAGAAGAACAGCTGATCAAGAAAATCAAAGGACTTATTTTTACCCCATCAAGCAATCAATTCAGAATTCATTTCCAGTCAAAACTTACTCAGAAATGGGCTTTACAAGAATTTGCTGAGAGGAAGGACAATGGGAAGATGACTGAAGGATCAAAAGAGAGGAAAAAGCAGGAAATTAGGACTCATAATGCTCAGTTGCATGCTGTAGTATACGTGGCAGGCGTAGCTGCTGCCGTTGCGGCCATTGCAGCTTTAATATAG 1200 0.4275 MQYQSLVYSNASNSNEQHGMEINSARVAAEEDVAKNSKDLFEQFDEKGLPQYKAAPLFNKLVFDKEKILMLLIWERRFIFGDFEREQQLLSVRPPTPLEQPKPAPVVPPRAASPRAPSPRAPSPRAASLKAPSLHATSPKATSSRVVHHHKEVQANSDQAMVWNQLKARSFQFNEEMMESLFGYNAAQEKSKPGMKKESREQTPQYIQIIEPKKAKNLSILLKALNVTLEEVRDALLEGNEIPPEFLNTLLNMAPNWASEAVEHHYMNASDLNLLEAHEAEASLAGRGAYTLMVGLTLIQTAAAKVAEYKAHVSEEQLIKKIKGLIFTPSSNQFRIHFQSKLTQKWALQEFAERKDNGKMTEGSKERKKQEIRTHNAQLHAVVYVAGVAAAVAAIAALI 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01679 399 PANTHER FORMIN-RELATED 89 259 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Aip02g01679 399 SUPERFAMILY Formin homology 2 domain (FH2 domain) 94 273 - -
Aip02g01679 399 Pfam Auxin canalisation 333 397 IPR008546 -
Aip02g01679 399 Gene3D Formin, FH2 domain 135 284 IPR042201 -
Aip02g01679 399 PANTHER FORMIN-LIKE PROTEIN 89 259 - -
Aip02g01679 399 MobiDBLite consensus disorder prediction 96 121 - -
Aip02g01679 399 Pfam Formin Homology 2 Domain 150 257 IPR015425 -
Aip02g01679 399 Coils Coil 215 235 - -
Aip02g01679 399 MobiDBLite consensus disorder prediction 92 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01679 Aip-Chr2 70922234 70926520 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01679 118 255 FH2 protein (formin) Gene Family AT5G54650 51.449 6.46e-34 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01679 - - aip:107625410 206.068