Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01677 ATGGCCAGAGATACACACCTTCACGCTGGATCCAAGCGCTCTATCTTTCATAGTGACATAAAACCTAGTAACATTCTTTTGGATAGCAATATGGTGCCTAAGCCCTCAGACTTTGGGCTTTCATTGCAGGGACCACTATCTACTTCCAAGCTAAAACCAATTGAAGTAGACTATGTTGCAGTCTCACTTGTAGGTACATTTAGATACGTAGCCCCTGAGTGTCAGCTATTACAAGGAGGTTATTAG 246 0.4268 MARDTHLHAGSKRSIFHSDIKPSNILLDSNMVPKPSDFGLSLQGPLSTSKLKPIEVDYVAVSLVGTFRYVAPECQLLQGGY 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01677 81 ProSiteProfiles Protein kinase domain profile. 1 81 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g01677 81 ProSitePatterns Serine/Threonine protein kinases active-site signature. 15 27 IPR008271 GO:0004672|GO:0006468
Aip02g01677 81 Pfam Protein kinase domain 6 74 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g01677 81 SUPERFAMILY Protein kinase-like (PK-like) 6 78 IPR011009 -
Aip02g01677 81 PANTHER OS07G0166700 PROTEIN 6 75 IPR045272 GO:0004714|GO:0006468
Aip02g01677 81 Gene3D Transferase(Phosphotransferase) domain 1 5 81 - -
Aip02g01677 81 PANTHER TYROSINE KINASE FAMILY PROTEIN 6 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01677 Aip-Chr2 70828405 70828719 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01677 6 73 Receptor kinase-like Gene Family AT5G38990 50.000 2.35e-14 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Aip02g01677 Pkinase 1.1e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01677 - - aip:107628375 160.229