Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01664 ATGATGTCACAAATCTTCATGGCAAAACAGAATAGCTGGTTTGGGTGGGTGAAGAGGTTATTCACATCTGAGTCAAACAACAAAAAACCAAAGAAATGGGGATGGGGACTTGGAAGGCTAAAGGGGAAACAACAGTACCCAAAAATCACTGCTCCAAGAAGAGCATTGATTGAAGCAAGTGCAGAGCAAAGAAAGCATGCATTGACAGTGGCAATTGCAACTGCAGCTGCAGCCGAGGCTGCAGTTGCGGCTGCACATGCTGCTGCCGAGGTTGTCAAGCTCACTGGTGGTTCTTGCTCTTATTCGTTCTTGGCCAAAGGTGATCGGAGCCTCGCCGCCATCAAGATTCAAAGCGCTTACCGCGCACATCTCGCAAGGAAAGCATTAAGAGGACTGAAGGGAGTGACAAAACTGCAAGCTCTCATTCGTGGTCAAGCAGTGAGACGTCGAGTGTCCAGGGCTTTGAAGAATTCGGCCACCAGTGCAGTTAAAATCCCGGAAACAATCAGCCAAATTGAAGAAAGCTACAGAAAAGACCAGATAATTTCTTTTGCAAAGCAAAAGAACAAGTTACATGAAAAAGAATTGAAGCTACAGCCAGAAGGGCATAGACATAGTCCAATAAGTTGGGATTCTAGGTTGCAGTCAAGAGAAGATATTGAAGCCACATGGTTGAGAAAGCAAGAGGCCGCTGCCAAAAGAGAACGCATGAAGCAATATTCCTTTTCACAAAGGGAAAGAAAACTTCCCCAAATGAGTGAAGAATCTGTTCACAACAGGGAATATGGAAACGAGAGAATCCGCACCTTAGGCCAATGGCTAAATAAGGAAGCCGTTGACTCGAATACATACCACCATAAACAAGATCATCCCTCGAACTTTATTACAAGAAGAGAAGCACATCAAGGACTCAGCCCGCAAATTTCGATTCCCCGGAGATCATTTTCGCATACAAAAAGATGTTCGGTTGGAGCTATTGAGATCTCCCTACCGAATTCTCCGGTCCTTCCAACTTACATGGCCGTGACTGAATCCAGCAAAGCGAAGGCGAGATCTATGAGCACGCCACGGCTAAGAACAGGGTATTTGGACACATGCTCCAACAAGAGCGAGTCTCGGAAATAA 1125 0.4578 MMSQIFMAKQNSWFGWVKRLFTSESNNKKPKKWGWGLGRLKGKQQYPKITAPRRALIEASAEQRKHALTVAIATAAAAEAAVAAAHAAAEVVKLTGGSCSYSFLAKGDRSLAAIKIQSAYRAHLARKALRGLKGVTKLQALIRGQAVRRRVSRALKNSATSAVKIPETISQIEESYRKDQIISFAKQKNKLHEKELKLQPEGHRHSPISWDSRLQSREDIEATWLRKQEAAAKRERMKQYSFSQRERKLPQMSEESVHNREYGNERIRTLGQWLNKEAVDSNTYHHKQDHPSNFITRREAHQGLSPQISIPRRSFSHTKRCSVGAIEISLPNSPVLPTYMAVTESSKAKARSMSTPRLRTGYLDTCSNKSESRK 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01664 374 Pfam IQ calmodulin-binding motif 133 150 IPR000048 GO:0005515
Aip02g01664 374 Pfam IQ calmodulin-binding motif 112 130 IPR000048 GO:0005515
Aip02g01664 374 SMART iq_5 108 130 IPR000048 GO:0005515
Aip02g01664 374 SMART iq_5 132 152 IPR000048 GO:0005515
Aip02g01664 374 ProSiteProfiles IQ motif profile. 133 160 IPR000048 GO:0005515
Aip02g01664 374 MobiDBLite consensus disorder prediction 346 374 - -
Aip02g01664 374 PANTHER IQ-DOMAIN 12 7 371 - -
Aip02g01664 374 Gene3D - 108 161 - -
Aip02g01664 374 MobiDBLite consensus disorder prediction 235 260 - -
Aip02g01664 374 ProSiteProfiles IQ motif profile. 109 137 IPR000048 GO:0005515
Aip02g01664 374 MobiDBLite consensus disorder prediction 346 367 - -
Aip02g01664 374 Pfam Protein of unknown function (DUF4005) 318 360 IPR025064 -
Aip02g01664 374 PANTHER IQ-DOMAIN 5-RELATED 7 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01664 Aip-Chr2 69771531 69775826 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01664 7 365 IQD Protein Family AT5G03960 42.204 2.80e-60 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01664 - - lang:109347509 385.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g01664 02 69771531 69775826 Aip02g01664 02 69771531 69775826 ECH