Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01649 ATGGATAACTATTTGAAGGAGTTCGAATTGGAACCGAAGGATCGTTCCATCGAAGCACTAAGTAGATGGAGATCTGCGGTCTCAGCCTGGGTCATCAAGAATCGCCGCAGGAGGTTCCGCAATGTTGTAGATCTCGTTAAACTAACACTCGCCGAGGAGAAGAAGAAGAAAATACAGGTTCCATCTCTCTTTCTCTCTCTTAATGCACTTTCAGTTTTTGAATACGAGCTATCGGAAAAGACAAGAGAATCTGGTTTCAGAATTGAACCAGATGATATAGCAACGCTTGTTTCTGCCCATGATCTAAAGAATTTTAAAAAAATTGGCGGAGCTGAAGGGATTGCGAGGAAACTCTCAGTCTCCGTGAACGATGGCGTTAGCCAAGATAGTATACATAACAGGCAACAAATTTATGGACTTAACCACTACACGGAGAGACCTTCAAAATCTTTCTTGATGTTTGTTTGGGAGGCATTGCATGACTTAACACTAATCATTCTCATAGTTTGTGCTCTAGTTTCTATAGCTATAGGGCTTCCCACTGAAGGATGGCCAAAGGGTGTTTATGATGGTCTTGGTATCATACTTAGTGTGTTTTTGGTTGTTACTGTTACTGCTATTAGTGACTACCAGCAATCCTTGCAATTCAGGGATTTGGACAAAGAGAAGAAAAAGCTCTTTGTCCAGGTGACCAGGGATGGGAAGAGACAGAAGGTTTCTATCTACGATTTGGTAGTCGGAGATATTGTCCATTTGTCAACTGGTGATCAAGTTCCAGCTGATGGAGTTTTTGTAACTGGATACTCATTACTAATTGATGAATCAAGTTTGTCAGGTGAGAGTGAACCAGTAAATATAGATGAACAAAAACCTTTTCTTCTTGCGGGAACCAAAGTGCAGGATGGTCAGGGAAAGATGATAGTTACAACAGTTGGCATGAGGACTGAATGGGGGAAGTTGATGGAAACTTTAAGCGAGGGAGGTGAGGAGGAGACTCCATTGCAAGTGAAATTGCATGGAGTTGCAACAATTATTGGTAAAATCGGGTTGGCTTTTGCCGTGTTGACATTTATCGTGTTGACAATAAGGTTTCTTGTTGAGAAAGCAGTCTCTGGTGACTTTGGTAGTTGGTCTATGAATGATGCAATGAAACTGCTGGACTACTTTGCTATTGCAGTGACCATAATAGTTGTCGCAATTCCGGAAGGATTACCATTAGCTGTGACACTTAGTCTTGCTTTTGCAATGAAAAAATTAATGAATGACAAGGCACTTGTGAGACATCTTTCGGCATGTGAGACTATGGGTTCTGCAAGTTGCATTTGCACAGATAAGACAGGAACATTGACCACTAACCATATGGTTGTGAACAAGATTTGGGTATGCGAAAAAGTGGCCGAGATCAAAGGTAGTGAGAGTGCAGAGAAGCTGAAAACAGAGATACCTGAGGAAGTAATGAGCATCCTTTTGCAGGCTATATTTCAAAATACATCTTCTGAAGTAGTTAAGGATGAAACCGGAAATAACACAATATTGGGAACACCAACAGAATCAGCATTGTTGGAATTTGGTTTGCTCACAGGTGGTGATTTTGATGCACAGCGCAGTACCTATAAGATAATTAAGGTTGAGCCTTTCAATTCAGTTCGGAAGAAGATGTCTGTGCTTGTGAGTCTTCCTAATGGAGGGGTCAGAGCTCTCTGCAAAGGAGCATCAGAAATAATACTAAGAATGTGTGACAAAATCATTGATTCTAATGGAAATGCTGCTGATCTTCCTGAAGAACAGGCGAATAAAGTTAACGATGTCATAAACGATTTTGCCTCTGAAGCTCTGAGAACTCTTTGTTTGGCTGTTAAAGATATAGACGCAACAGAAGGGGAAAACAGTATCCCTGATCATGGCTATACTCTGATAGCAATTGTAGGAATCAAGGATCCTGTGCGGCCTGGGGTCAGGGAAGCTGTTCAAACTTGTTTAGCAGCTGGAATAACCGTCCGTATGGTGACCGGTGATAACATAAATACAGCTAGAGCCATAGCTAAAGAATGTGGTATACTCATCGAGGGTGGTGTAGCTGTAGAAGGACCAGAGTTTCGAAACTTGTCGCCAGAGCAAATGAGAGATATCATACCAAATATTCAGGTTGTAATGGCACGTTCCCTACCGCTTGACAAGCACACCTTAGTATCCAATTTGAGGAATATGTTTGGTGAGGTTGTAGCTGTAACTGGTGATGGAACCAATGATGCTCCTGCACTGCATGAGGCAGACATTGGACTTGCCATGGGGATCGCTGGAACTGAGGTTGCCAAAGAAAATGCTGATGTGATTATAATGGATGATAACTTCACTACTATCGTTAACGTGGCCAAATGGGGACGTGCCATATACATAAACATACAAAAATTTGTGCAGTTTCAGCTAACTGTAAATATTGTTGCTCTGGTTATCAACTTTGTTTCTGCATGCATCACTGGATCTGCACCACTCACAGCTGTTCAGTTGCTTTGGGTAAATTTGATTATGGACACATTGGGTGCATTGGCTCTGGCTACTGAGCCTCCCAATGATGGACTAATGGAAAGACCCCCGGTTGGAAGAAAAGCAAGTTTTATCACCAAACCAATGTGGAGGAACATCTTTGGTCAGAGTTTGTATCAATTGATTGTCCTTGCACTTCTCAATTTTGATGGGAAGAGGCTACTGGGACTTACTGGTTCAGATGCAACTCAAGTGCTCAACACTTTGATCTTCAACTCCTTTGTATTTTGCCAGGAGGAGGACCTTGATTGCCTTGAGGAAGGTTGGATCTACTATTGCTATTTGGATGTTGATACCTCCCTTGAGGTTGAGATTGTGAAGGGTGTTGGTAGGATTGTTGGTATTGTGGTTGACCTTGAAGAGCTTGATGATAGTAGGCTTGGCTTGGGTAAGGTTGAGCTTGCGGGGCTTGGTtccacatttgattag 2973 0.4201 MDNYLKEFELEPKDRSIEALSRWRSAVSAWVIKNRRRRFRNVVDLVKLTLAEEKKKKIQVPSLFLSLNALSVFEYELSEKTRESGFRIEPDDIATLVSAHDLKNFKKIGGAEGIARKLSVSVNDGVSQDSIHNRQQIYGLNHYTERPSKSFLMFVWEALHDLTLIILIVCALVSIAIGLPTEGWPKGVYDGLGIILSVFLVVTVTAISDYQQSLQFRDLDKEKKKLFVQVTRDGKRQKVSIYDLVVGDIVHLSTGDQVPADGVFVTGYSLLIDESSLSGESEPVNIDEQKPFLLAGTKVQDGQGKMIVTTVGMRTEWGKLMETLSEGGEEETPLQVKLHGVATIIGKIGLAFAVLTFIVLTIRFLVEKAVSGDFGSWSMNDAMKLLDYFAIAVTIIVVAIPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVNKIWVCEKVAEIKGSESAEKLKTEIPEEVMSILLQAIFQNTSSEVVKDETGNNTILGTPTESALLEFGLLTGGDFDAQRSTYKIIKVEPFNSVRKKMSVLVSLPNGGVRALCKGASEIILRMCDKIIDSNGNAADLPEEQANKVNDVINDFASEALRTLCLAVKDIDATEGENSIPDHGYTLIAIVGIKDPVRPGVREAVQTCLAAGITVRMVTGDNINTARAIAKECGILIEGGVAVEGPEFRNLSPEQMRDIIPNIQVVMARSLPLDKHTLVSNLRNMFGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVNVAKWGRAIYINIQKFVQFQLTVNIVALVINFVSACITGSAPLTAVQLLWVNLIMDTLGALALATEPPNDGLMERPPVGRKASFITKPMWRNIFGQSLYQLIVLALLNFDGKRLLGLTGSDATQVLNTLIFNSFVFCQEEDLDCLEEGWIYYCYLDVDTSLEVEIVKGVGRIVGIVVDLEELDDSRLGLGKVELAGLGSTFD 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01649 990 ProSitePatterns E1-E2 ATPases phosphorylation site. 444 450 IPR018303 -
Aip02g01649 990 SFLD Haloacid Dehalogenase 424 797 - -
Aip02g01649 990 Gene3D - 125 325 - -
Aip02g01649 990 SUPERFAMILY Calcium ATPase, transduction domain A 227 323 IPR008250 -
Aip02g01649 990 Pfam Ca2+-ATPase N terminal autoinhibitory domain 6 47 IPR024750 GO:0005516
Aip02g01649 990 Pfam haloacid dehalogenase-like hydrolase 440 758 - -
Aip02g01649 990 Gene3D - 439 789 IPR023214 -
Aip02g01649 990 PRINTS H+-transporting ATPase (proton pump) signature 744 760 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip02g01649 990 PRINTS H+-transporting ATPase (proton pump) signature 776 801 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip02g01649 990 PRINTS H+-transporting ATPase (proton pump) signature 600 618 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip02g01649 990 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 448 652 IPR023299 GO:0000166
Aip02g01649 990 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 194 364 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip02g01649 990 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 379 475 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip02g01649 990 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 536 687 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip02g01649 990 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 717 832 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip02g01649 990 Pfam Cation transporter/ATPase, N-terminus 109 174 IPR004014 -
Aip02g01649 990 SUPERFAMILY Calcium ATPase, transmembrane domain M 109 926 IPR023298 -
Aip02g01649 990 Pfam E1-E2 ATPase 228 420 - -
Aip02g01649 990 SFLD p-type atpase 424 797 IPR044492 -
Aip02g01649 990 PANTHER CALCIUM-TRANSPORTING ATPASE 6 926 - -
Aip02g01649 990 SMART Cation_ATPase_N_a_2 104 179 IPR004014 -
Aip02g01649 990 PANTHER CATION TRANSPORTING ATPASE 6 926 - -
Aip02g01649 990 Gene3D - 157 890 - -
Aip02g01649 990 PRINTS P-type cation-transporting ATPase superfamily signature 640 651 - -
Aip02g01649 990 PRINTS P-type cation-transporting ATPase superfamily signature 744 763 - -
Aip02g01649 990 PRINTS P-type cation-transporting ATPase superfamily signature 768 780 - -
Aip02g01649 990 PRINTS P-type cation-transporting ATPase superfamily signature 442 456 - -
Aip02g01649 990 PRINTS P-type cation-transporting ATPase superfamily signature 662 672 - -
Aip02g01649 990 PRINTS P-type cation-transporting ATPase superfamily signature 273 287 - -
Aip02g01649 990 Pfam Cation transporting ATPase, C-terminus 829 926 IPR006068 -
Aip02g01649 990 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 101 926 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Aip02g01649 990 CDD P-type_ATPase_Ca_PMCA-like 133 877 - -
Aip02g01649 990 Gene3D - 15 68 - -
Aip02g01649 990 SUPERFAMILY HAD-like 441 849 IPR036412 -
Aip02g01649 990 Gene3D - 452 647 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01649 Aip-Chr2 68558826 68578726 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01649 64 964 Primary Pumps ATPases AT3G57330 69.365 0.0 1306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01649 K01537 - gmx:100785768 1480.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g01649 02 68558826 68578726 Aip02g01649 02 68558826 68578726 ECH
Aip06g00433 06 5071081 5080447 Aip02g01649 02 68558826 68578726 PCT