Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01648 ATGAAACTCTACCTTTCTCCTATCCTAACACTCTTCCAACCCTTTGTATTCACCCTGAAAAGAAAAGCCCTAAAAACCCTTTTCGAAAGAACCAGCGCACACAACACAATACACACACGCACCACCGCACCCACGCGGAATAGGAGACCTCGAGGAAGGAGACGCCGCCTTGCTGCCAGCTCCGTCGAAGACCAGCCCGCCGCCGCTGTCGAGTCAAACCCGAGAAAGAGAGTGTGTGCGACGATGAGAGAGGAGGAGCCGTCACCAAACGCGTCGCCGCCGCTGGAGGAGCTTCGCTCTTCACCGTCGCCGAGGAGGGGAAAGAGGAGCTGCTCCCGTCGCGCCAGTCACCGTCGTGCTTCCTGGTTGCCGATGAAGGAGCCGCGAGAACCGTTGCCGTCGCGGAGGAGGGGGACGCGCGAGAGGGAGCCGTCAGTGTGGTCGCCGTCGCAGCTGTTGATTCTCAGGAAATCCAAGGAAATCAAGTTCTGGGTTGATTCTTTTCTGGTTCACAGCTTCTTGCAGAAGAACAGTTTCTCTGCCAGCTCAAAAGTTTCTACTATTGCAGAAGAACAGTTATGGTTGCAAAGTCGTCGTGCTGCCGTCTCCCTCTCCTTCACTCATCGCACCTCCGTTTCCATCTCTCAACCCTCTTCCTCGCCACCGGTCAGTGCCAACTCCTTCCCTTCTAATTATGTTGGAGATCTACATGGAGATCTTAAGCAGGCTAGATATGCACTTCAAATGGCTGGTGTATTGAGCTCTAATGGTCAAGACTTATGGACTGATGGAGAAACGGTGTTGATTCAAGTTGGAGATATACTAGATCGAGATGAAGAAGAAATTGCTATCTTGTCCTTGTTGCGATCATTGGATAAACAGGCAAAGGCAAAAGGTGGAGCTGTGTTTCAGGTCCTTCTTAGAGGCCCAAAGAACTTCAGGGAAGCTGTGAAACACTTGGGTCTTGCTCTTGGTGTTCTTTACAGCTATATCAAGCCTTATGTACGATCTAAGGGAAGGAAGTTTGAGaaggttagaggaaggaagaatagcaaaggacttggggtttaa 1071 0.4949 MKLYLSPILTLFQPFVFTLKRKALKTLFERTSAHNTIHTRTTAPTRNRRPRGRRRRLAASSVEDQPAAAVESNPRKRVCATMREEEPSPNASPPLEELRSSPSPRRGKRSCSRRASHRRASWLPMKEPREPLPSRRRGTREREPSVWSPSQLLILRKSKEIKFWVDSFLVHSFLQKNSFSASSKVSTIAEEQLWLQSRRAAVSLSFTHRTSVSISQPSSSPPVSANSFPSNYVGDLHGDLKQARYALQMAGVLSSNGQDLWTDGETVLIQVGDILDRDEEEIAILSLLRSLDKQAKAKGGAVFQVLLRGPKNFREAVKHLGLALGVLYSYIKPYVRSKGRKFEKVRGRKNSKGLGV 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01648 356 SUPERFAMILY Metallo-dependent phosphatases 229 296 IPR029052 -
Aip02g01648 356 PANTHER SHEWANELLA-LIKE PROTEIN PHOSPHATASE 1 180 306 - -
Aip02g01648 356 MobiDBLite consensus disorder prediction 120 143 - -
Aip02g01648 356 Pfam Ribosomal protein 60S L18 and 50S L18e 303 353 IPR021131 -
Aip02g01648 356 Gene3D - 168 309 IPR029052 -
Aip02g01648 356 PANTHER SHEWANELLA-LIKE PROTEIN PHOSPHATASE 1 180 306 - -
Aip02g01648 356 MobiDBLite consensus disorder prediction 35 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01648 Aip-Chr2 68321460 68326343 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01648 305 356 Cytoplasmic Ribosomal Protein Gene Family AT3G05590 69.231 1.72e-16 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01648 - - aip:107622497 169.859