Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01643 ATGTTAGGGGCTGGTGTTAGTCAGGTTGCTGGCCTGCTATGGTGTTTGAGGTTTGTTATGAAAAATGGCGCCAAGGGATGCGAGGTCATCGTTAGTGGCAAGTTGAGGGCTCAGCGCGCTAAATCCATGAAGTTCAAGGACGGGTACATGATTTCCTCAGGGCAACCAGTCAAGTACTACATTGATTCTGCTGTAAGACATGTACTCCTTAGGGATTTGGATAAGAAATGTTGCAGATGA 240 0.4667 MLGAGVSQVAGLLWCLRFVMKNGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKYYIDSAVRHVLLRDLDKKCCR 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01643 79 Gene3D - 2 72 IPR036419 -
Aip02g01643 79 Pfam Ribosomal protein S3, C-terminal domain 15 70 IPR001351 GO:0003735|GO:0006412
Aip02g01643 79 PANTHER BNAC06G00510D PROTEIN 15 72 - -
Aip02g01643 79 SUPERFAMILY Ribosomal protein S3 C-terminal domain 10 70 IPR036419 -
Aip02g01643 79 PANTHER 30S/40S RIBOSOMAL PROTEIN S3 15 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01643 Aip-Chr2 67747403 67747893 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01643 15 71 Cytoplasmic Ribosomal Protein Gene Family AT3G53870 87.719 1.62e-30 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01643 K02985 - aip:107639128 127.487