Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01626 ATGTCTACCGCCGCATCCAGCTCTTGGGGTACTGCGCTCGTTAAGATCTCTCCTTACACCTTCTCCGCCGTCGGCATCGCCGTCTCCATCGGTGTCTCTGTTCTCGGTGCTGCTTGGGGGATTTACATAACTGGTAGCAGCTTGATCGGTGCTGCAATCAAGGCTCCCCGAATCACTTCCAAGAATCTCATTAGTGTAATCTTCTGTGAAGCTGTTGCTATATATGGTGTTATTGTGGCTATTATTCTACAAACAAAATTAGAAAGCGTTCCTTCATCACAGATCTATGCAGCCGAGTCTCTTAGGGCTGGATATGCAATCTTTGCTTCTGGACTTATTGTTGGCTTCGCAAATCTCGTTTGTGGATTGTGTGTAGGGATAATTGGAAGCAGCTGTGCATTGTCTGATGCTCAAAACTCCTCTCTCTTTGTGAAGATTCTCGTGATTGAAATTTTTGGTAGTGCTCTTGGGCTATTTGGAGTTATTGTTGGAATCATTATGTCAGCTCAAGCAACATGGCCAACAAAA 528 0.4508 MSTAASSSWGTALVKISPYTFSAVGIAVSIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPSSQIYAAESLRAGYAIFASGLIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01626 176 Gene3D - 19 173 IPR035921 -
Aip02g01626 176 Pfam ATP synthase subunit C 25 83 IPR002379 GO:0015078|GO:0033177|GO:1902600
Aip02g01626 176 Pfam ATP synthase subunit C 108 167 IPR002379 GO:0015078|GO:0033177|GO:1902600
Aip02g01626 176 CDD ATP-synt_Vo_c_ATP6F_rpt1 21 83 - -
Aip02g01626 176 PANTHER V-TYPE PROTON ATPASE 21 KDA PROTEOLIPID SUBUNIT 4 174 - -
Aip02g01626 176 SUPERFAMILY F1F0 ATP synthase subunit C 101 168 IPR035921 -
Aip02g01626 176 CDD ATP-synt_Vo_c_ATP6F_rpt2 103 167 - -
Aip02g01626 176 PRINTS Vacuolar ATP synthase 16kDa subunit signature 146 169 IPR000245 GO:0033179|GO:0046961|GO:1902600
Aip02g01626 176 PRINTS Vacuolar ATP synthase 16kDa subunit signature 63 87 IPR000245 GO:0033179|GO:0046961|GO:1902600
Aip02g01626 176 PRINTS Vacuolar ATP synthase 16kDa subunit signature 119 145 IPR000245 GO:0033179|GO:0046961|GO:1902600
Aip02g01626 176 PRINTS Vacuolar ATP synthase 16kDa subunit signature 37 61 IPR000245 GO:0033179|GO:0046961|GO:1902600
Aip02g01626 176 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 4 174 - -
Aip02g01626 176 SUPERFAMILY F1F0 ATP synthase subunit C 17 86 IPR035921 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01626 Aip-Chr2 66516564 66520552 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01626 6 176 Primary Pumps ATPases(2) AT2G25610 93.567 4.02e-111 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01626 K03661 - tcc:18588964 310.457