Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01614 ATGTGTTCATCAGATGCTATCAGCCCGTATGCAACCAGCTCTAGACCTCTTGTGTTGCCACGAAGAAACACTGACCCAAACATTTCATTGCTATCTGTTGTAGTAGAGTTTTGCGAGATAAAAATAGGATACCCAATCTTAAGGAACAATGTTAAAAGGGAAAAGATAAAACGGAAGGTTTTCTTCCTCCCCTTATCCTCCGTTGCAATCTCACCATCCCTTCCTATCTCCACCACTGAGAATGACTCAGCTAACTTCTTCTCAGCTAACTTCTTCTCCCGCCCTCCCCCACCCAGCCACGGTGGCTTTGGCAGCGTCTTGTTCCAACAACTCATCCGACGAGATTCGAAGATTTTGAACCACGAAATGCTATTTTTCTTTGGGATTGAGAAAGTGTTCAGTGTTAACGAGTCTGTTCAGGCAAATCCAAGCACACAAACAGCCTCACCTATGACGACGATGGAGCCTGATCTGCATTGTCGGTTGTCTTCGACAGTTGATGGCTTCGCCGTCTCCATCAGACATCCCACAATTTCGCGTGTTTCGCTAAATTACCGCACTGTTGCTGTTTGGCACAGGGTTGCCGGGGATGAAGATACCACTGGGGGCGTGCGCGTCGCCGAGGAAGGAGAAATGTGCGACGGAGCAGACGACGGAGTTGGATCGTTTGGGGGCGAAGGCTTTGCAGGGATGAAGTCGGACGAGTACGATTTACAGGAAGATGAAACAGAACACGACCATCATGAAGAGGCCGATGTCGACAATGGGGATGCGGTTGAAATGGAAGACAATGTTGACATTGCATTTGAGTTCTACCAGCAATATGCAAAGCACCATGGCTTCGGCGTGAGACGTTCCAGAAGTGAAAAATGCGTCAAATTAAGGATACGGCAGGAGTTCGTGTGCCACCGACAAGGGTACCGATCCTCGAAGTTCTACTCGATGCCTAACCGGCAAAAGAGGCCGAGGGCCGAGACACGGTGTGGATGCTCTGCAAAGATGCTACTCCGCATGGACGATGAATCAGAACGTTGGCACGTTGCGTACTTTTTAGACGCGCATAACCACCATGTTCTTAAGTTGCGATTTTCTTCCATGCTCCCAGGCCATCGGAGGATGAGCGAAGCGGACATCGAGCAGATGAACGACATGCGCAAAGGGGGCATTGGCGTCTCGCGAATCCACGGTTTTATGGCGAGCCTAGCCGGCGGGTATCATAATGTCCCGTACACAACAAGGGACATGCACAATGCAAATGATCCAGCACTATACTACAAGGAAGTTGTTGACGGTGAGGGCGTGTTGCAACATTTGTTTTGGTGTGACGGCACCAGCCAAATTGATTACCAGGTTTTTGGAGACGTGGTTGCATTTGATGCAACGTACAAGAAAAACGTTTACCTTTTACCTCTTGTAGTATTCTCCGGTGTGAATCACCACAACCAAATGGTTGTCTTTGCTGCTGCACTGGTGGCAGACGAGAAAGAAGAGACCTATGTCTGGCTGCTTCAACAGTTGCAAACTTCAATGAAAGGGAAGGCTCCCGTGTCCATAATAACCGATGGTGACAGAAAAATGAAGTCTGCGATCGAGCAAGTTTTTCCAGAGGCTCACCATTGA 1620 0.4883 MCSSDAISPYATSSRPLVLPRRNTDPNISLLSVVVEFCEIKIGYPILRNNVKREKIKRKVFFLPLSSVAISPSLPISTTENDSANFFSANFFSRPPPPSHGGFGSVLFQQLIRRDSKILNHEMLFFFGIEKVFSVNESVQANPSTQTASPMTTMEPDLHCRLSSTVDGFAVSIRHPTISRVSLNYRTVAVWHRVAGDEDTTGGVRVAEEGEMCDGADDGVGSFGGEGFAGMKSDEYDLQEDETEHDHHEEADVDNGDAVEMEDNVDIAFEFYQQYAKHHGFGVRRSRSEKCVKLRIRQEFVCHRQGYRSSKFYSMPNRQKRPRAETRCGCSAKMLLRMDDESERWHVAYFLDAHNHHVLKLRFSSMLPGHRRMSEADIEQMNDMRKGGIGVSRIHGFMASLAGGYHNVPYTTRDMHNANDPALYYKEVVDGEGVLQHLFWCDGTSQIDYQVFGDVVAFDATYKKNVYLLPLVVFSGVNHHNQMVVFAAALVADEKEETYVWLLQQLQTSMKGKAPVSIITDGDRKMKSAIEQVFPEAHH 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01614 539 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 260 413 IPR031052 GO:0006355
Aip02g01614 539 PANTHER OS02G0262500 PROTEIN 417 539 - -
Aip02g01614 539 PANTHER OS02G0262500 PROTEIN 260 413 - -
Aip02g01614 539 Pfam MULE transposase domain 455 539 IPR018289 -
Aip02g01614 539 Pfam FAR1 DNA-binding domain 270 359 IPR004330 -
Aip02g01614 539 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 417 539 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01614 Aip-Chr2 64932812 64935372 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip02g01614 FAR1 6.1e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01614 - - ahf:112701185 593.193