Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01612 ATGCCGGCGCTTGCTGATTTCCGCTTCTTCAATTTCATAATCCCCAACATGGAAAATCAAATTAGAATGCCGCCGACCTTCTCCAACCTAGTCCGGGAGAACATGAGCAACCGCGTCGAGATAAGCACTACAAATGGTCAGTCGTGGAGCATCTCGTGGGTTGTCGAGGAGGAGCATCCGCATCAAATCGTCTTCACTGGAGGGTGGCGAGCCTTTTACGAACACTACCATCTTCGAATCGGTGCCATGCTGCTATTATCGTATCACCAACCAAAGTTTTTCTATGTGGCCCTCCATGGCACAAGTTTCTGCGAGATCAACTATGGAAAAAACTTGCGAAACGGAAGTCTTCCGGCAATACCCGCACATGGCAACTATACAGTCCAGTTCTTCGCGATAATGCTAGTGAACAACCCTGATACACTGATGCTCCCACCACGGTTCTCGCGGGATTATGGCCAATCCCTACCGCGACCCCTGACCCTAACCACGCCTACAGGACAGCGTCATCGCGTGGGCTGGAATATGGAACTTAATGGAAGGATCGTTCTTCATGGAGGATGGGACGCTGTCTGGGAACACTATGGCCTAAGGGATGAGTGGCTGGTACTGTTCCATTATCACGACATTCAAAACACCATGTATGTCATGTTCTTCAACTGTCATACAATAGAAATCAACTACTTGGCCCATGCCGGGCCGAGGACGGACTGCACTTTTATAAGCTATCCGACGGCCCCCAGGTCAATGCACATAGCCGATGGGTTCAGATCGACCAATCCCTTCTTTGTCAAGCCAATCGTACACCGCCTGGCATCCCGTTTTCTCCCAAATGTCCTACCTCTTCCGGGAGTCTACGAGGATAGCCCAATTTCGATTACCAACGAGAGGGGCGCGTGGACCGTTCAGTATACGCACTATGTCGGGAGGACGAACGGATGTTTTGGAGTAGGCTGGTCTACCTTAGCAACTGCATGCCAACTAAGACACGGCCATGTGTGTGTCTTCGAGCGGCTAGTGCCGCAAGACTACCAGCTGCATATATATTGA 1050 0.5076 MPALADFRFFNFIIPNMENQIRMPPTFSNLVRENMSNRVEISTTNGQSWSISWVVEEEHPHQIVFTGGWRAFYEHYHLRIGAMLLLSYHQPKFFYVALHGTSFCEINYGKNLRNGSLPAIPAHGNYTVQFFAIMLVNNPDTLMLPPRFSRDYGQSLPRPLTLTTPTGQRHRVGWNMELNGRIVLHGGWDAVWEHYGLRDEWLVLFHYHDIQNTMYVMFFNCHTIEINYLAHAGPRTDCTFISYPTAPRSMHIADGFRSTNPFFVKPIVHRLASRFLPNVLPLPGVYEDSPISITNERGAWTVQYTHYVGRTNGCFGVGWSTLATACQLRHGHVCVFERLVPQDYQLHIY 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01612 349 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 123 231 - -
Aip02g01612 349 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 7 109 - -
Aip02g01612 349 SUPERFAMILY DNA-binding pseudobarrel domain 129 221 IPR015300 -
Aip02g01612 349 CDD B3_DNA 130 220 IPR003340 GO:0003677
Aip02g01612 349 SUPERFAMILY DNA-binding pseudobarrel domain 258 348 IPR015300 -
Aip02g01612 349 SUPERFAMILY DNA-binding pseudobarrel domain 14 108 IPR015300 -
Aip02g01612 349 SMART B3_2 9 102 IPR003340 GO:0003677
Aip02g01612 349 SMART B3_2 130 222 IPR003340 GO:0003677
Aip02g01612 349 Gene3D - 124 222 IPR015300 -
Aip02g01612 349 Gene3D - 4 104 IPR015300 -
Aip02g01612 349 ProSiteProfiles B3 DNA-binding domain profile. 127 222 IPR003340 GO:0003677
Aip02g01612 349 PANTHER B3 DOMAIN-CONTAINING 123 231 - -
Aip02g01612 349 Gene3D - 245 349 IPR015300 -
Aip02g01612 349 PANTHER B3 DOMAIN-CONTAINING 7 109 - -
Aip02g01612 349 ProSiteProfiles B3 DNA-binding domain profile. 6 102 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01612 Aip-Chr2 64928877 64930284 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01612 17 108 B3 DNA Binding Superfamily AT3G18990 28.261 6.25e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01612 - - ahf:112746889 597.045