Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01604 ATGAAGGTCTATGCAAAAGTTCATGCAAACTCAAAAATATGCTATTCGGGTTACCGGTTACGAGTAAACAACTTTCCTAGCCTGAAGGTAAATGGTTGTTTGCAATACTCGGACAAAATTCTCGATGGCTTCTACCTAATCCATGGGGTGGATGCTTACACATGGTCGATAAGTTCTGATCTGCAGAATGTTGGTATAATTCCTTCATTTGAATCACTGATGTCAATAGAACCTTGCGATGACTCGTCAATTGTAGTGGTTGCTATTGATAAATTTAGAGATCCTGGTCTGAGAGAACTGCAAAGTAGAGTAGTCAGTCTTTCAAGTAGCTGGAATTCTCGAAAATTTGCAGCTGTTCAGGTTGCAAATCTTGTTTATAGTAGGATGGGTGGAGGACGTTCAACTAAGGAAAATTTAGGCTCACAGTGGAAGGAGTGCGCCCAAAAACTAAAAAGCTGCCTGAATTCTGTCATTCTTCCGATTGGAAGCTTAGCTGTTGGTCTTTGTGTTCACCGAGCATTGCTGTTTAAAGTGTTAGCTGACTTAATTGACTTACCCTGCCGAATTGCTAAGGGCTGCAAGTATTGTAGCAGGGATGTTGGCGCTTCATGCATAGTGCAATTTGATTCTGACAGGGAGTATATGATTGATTTAGTTGAAAGGCCTGGCTCAGTGTGCCAGCCTGACTCTTTGCTGAACTCTGCATCATCAATGGTGGTCTCTTCACCATTATGTCACCCAAAGTTCAAGACAGTTGAAGCAGCTGGATATACTAAGACATTAGCCCAATCATTTTTCTTGGACAGTCAAGGATTGCACCATATATTTGATACAACATCAGGTGGTAAAGTTAATCTTAGTGACAGAATGGATGTAAAAGAAACTAGAACTTCTAGTGCACACTATGCCCATGGGAATGACCACCTAGTTGCATCGGGTCTTAGTGCAGATGACTATGTTTCCGTTACTGAAACAAACCCGTCTGTAGTTGATCTTGGTGTGGAGGACCTAGACATTCCATGGAGTGAACTTGTTCTGAAGGAGAACATTGGGGCAGGATCATTTGGAACTGTCATTCGTGCAGATTGGCGTGGTTCTGATGTTGCTGTGAAGATTCTTAAGGTGCAAGATTTTGATTCTGAGCGAATAGAAGAGTTTCTGAAGGAGGTCTCCCTAATGAAGCGCATGCGGCACCCAAACATTGTACTTCTGATGGGTGCAGTATTTCAACCCCCAAGGTTATCTATAGTAACAGAATATTTATCAAGAGGCAGCTTGTATGAACTTCTGCGCATGCCTGGTGTTGGAATATCACTCAGTGAGATGCGTCGTTTAAGCATGGCTTATGACGTGGCAAGTGGAATGAATTATCTCCATCAAATGAGACCTCCCATTGTTCATGGAGATTTGAAGTCCCCAAATCTTTTGGTTGACAATACATACACTGTCAAGGTAGCTGACTTTGGCCTTTCACGAACAAAGGCAAATACATTCCTTTCATCTAAAACTGCCGCTGGGACACCTGAATGGATGGCGCCAGAAGTCATCCTAGGTAAACCATCAAATGAAAAATGCGATGTATTCAGCTTTGCTGTAATATTGTGGGAACTAGTTACCCTGGAACAGCCATGGAGACAGTTAAATCCTTCACAGGTTGTTGCAGCTGTTGGTTTTATGGACCAAAGACTAGAGATTCCAAGCCATGTAAATCCTCAAGTGACTGCGTTGATTGAGCTCTGTTGGGATACTGATCCCACAAGACGCCCTTCTTTCTCCCATGTTATGAAACGTTTGCGGCAAATAACTGCCGATGCAAATGGAAAGAAACCCTACTCAGTACTCACAACTCTTCACTCTCACTCACAGTCTCTCACCGTATCTCACATAGTCACAGACTCACACACTCCTCAGACCTCACTCACGCTCACCGTCACACGCCGAGTCATCGACGCCGTCCGCCGTCTCCTCTTCGACGTCGCTACTGCCTCCTCTTCTTGTCAGATCTTCGGGACAGTCGAAGTCGATGCTGCTGCCATAGCCGCAGTCGCAGCCACAAACATAGACGCAGACGCAGCCACCATCGCCGCCGCCGTTACCGCCATGCAGTGA 2109 0.4462 MKVYAKVHANSKICYSGYRLRVNNFPSLKVNGCLQYSDKILDGFYLIHGVDAYTWSISSDLQNVGIIPSFESLMSIEPCDDSSIVVVAIDKFRDPGLRELQSRVVSLSSSWNSRKFAAVQVANLVYSRMGGGRSTKENLGSQWKECAQKLKSCLNSVILPIGSLAVGLCVHRALLFKVLADLIDLPCRIAKGCKYCSRDVGASCIVQFDSDREYMIDLVERPGSVCQPDSLLNSASSMVVSSPLCHPKFKTVEAAGYTKTLAQSFFLDSQGLHHIFDTTSGGKVNLSDRMDVKETRTSSAHYAHGNDHLVASGLSADDYVSVTETNPSVVDLGVEDLDIPWSELVLKENIGAGSFGTVIRADWRGSDVAVKILKVQDFDSERIEEFLKEVSLMKRMRHPNIVLLMGAVFQPPRLSIVTEYLSRGSLYELLRMPGVGISLSEMRRLSMAYDVASGMNYLHQMRPPIVHGDLKSPNLLVDNTYTVKVADFGLSRTKANTFLSSKTAAGTPEWMAPEVILGKPSNEKCDVFSFAVILWELVTLEQPWRQLNPSQVVAAVGFMDQRLEIPSHVNPQVTALIELCWDTDPTRRPSFSHVMKRLRQITADANGKKPYSVLTTLHSHSQSLTVSHIVTDSHTPQTSLTLTVTRRVIDAVRRLLFDVATASSSCQIFGTVEVDAAAIAAVAATNIDADAATIAAAVTAMQ 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01604 702 Pfam Protein tyrosine and serine/threonine kinase 345 598 IPR001245 GO:0004672|GO:0006468
Aip02g01604 702 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 29 294 - -
Aip02g01604 702 SMART serkin_6 344 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g01604 702 Pfam Ethylene-responsive protein kinase Le-CTR1 30 225 - -
Aip02g01604 702 Gene3D Transferase(Phosphotransferase) domain 1 423 611 - -
Aip02g01604 702 PRINTS Tyrosine kinase catalytic domain signature 569 591 IPR001245 GO:0004672|GO:0006468
Aip02g01604 702 PRINTS Tyrosine kinase catalytic domain signature 459 477 IPR001245 GO:0004672|GO:0006468
Aip02g01604 702 PRINTS Tyrosine kinase catalytic domain signature 418 431 IPR001245 GO:0004672|GO:0006468
Aip02g01604 702 PRINTS Tyrosine kinase catalytic domain signature 506 516 IPR001245 GO:0004672|GO:0006468
Aip02g01604 702 PRINTS Tyrosine kinase catalytic domain signature 525 547 IPR001245 GO:0004672|GO:0006468
Aip02g01604 702 ProSiteProfiles Protein kinase domain profile. 344 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g01604 702 CDD STKc_MAP3K-like 350 598 - -
Aip02g01604 702 Gene3D Phosphorylase Kinase; domain 1 337 422 - -
Aip02g01604 702 SUPERFAMILY Protein kinase-like (PK-like) 323 598 IPR011009 -
Aip02g01604 702 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 320 607 - -
Aip02g01604 702 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 29 294 - -
Aip02g01604 702 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 320 607 - -
Aip02g01604 702 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Aip02g01604 702 ProSitePatterns Protein kinases ATP-binding region signature. 350 371 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01604 Aip-Chr2 64366106 64380883 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01604 30 605 MAP Kinase Kinase Kinase AT5G03730 54.967 0.0 629
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Aip02g01604 PK_Tyr_Ser-Thr 5.3e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01604 K14510 - gmx:100807496 897.501