Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aip02g01602 | ATGGATACGGGCATACGGGCATATCCTCTGAGCCTAACTGGCTTGATGCCAGATAACACTTCAAGGATGTCCTGTAGAGGCCAGAGGCTATATCATCCTTTGAGTTGTGCCACGTGGTCTGAGTACACGGTTATCGATGTTAACTACCTTGTTAAGGTTGATCCAAGCATTAATCCAGCTCATGGCAGCTTCATCTCATGTGGGTTCTCAATTTGCTATGGAGCTGCATGGAAGGAAGCTAAGGTTGAAAGTGGATCAAGTGTTGTTGTTTTTGGTCTTGGTGCTGTTGGATTAGGGGTTATAAGTGTAGCAAAAATGTTGGGGGCAACTAAGATAATAGGGATTGACATAAATGACATGAAAAGAGAAAAAGGGAATCCTGAAGCTTTGGGTGCTGAGCTATTAGATACACTAGTAAAGATGGCTCCTACTAAAGAGGAAGAGATAAAACTCAAAAACTACAATGCTGACCTCTCAAAACTTGGCTCAGCGGAAAGGTTTCTTAAAGTTATGCTTGATATCCCTTTTGCCTTTAAGAGGTTTGAAGCTATGCTATATAGTTCTAACTTTGATTTAGAAGTCAACTATCTCAGGAAGTCTTTTCAAACCCTAGAGGCAACAAGTGAGGAATTAAGGAACAGTTGA | 645 | 0.4124 | MDTGIRAYPLSLTGLMPDNTSRMSCRGQRLYHPLSCATWSEYTVIDVNYLVKVDPSINPAHGSFISCGFSICYGAAWKEAKVESGSSVVVFGLGAVGLGVISVAKMLGATKIIGIDINDMKREKGNPEALGAELLDTLVKMAPTKEEEIKLKNYNADLSKLGSAERFLKVMLDIPFAFKRFEAMLYSSNFDLEVNYLRKSFQTLEATSEELRNS | 214 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aip02g01602 | 214 | Gene3D | Formin, FH2 domain | 103 | 214 | IPR042201 | - | |
| Aip02g01602 | 214 | PANTHER | ALCOHOL DEHYDROGENASE | 7 | 126 | - | - | |
| Aip02g01602 | 214 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 124 | 214 | - | - | |
| Aip02g01602 | 214 | Pfam | Formin Homology 2 Domain | 124 | 214 | IPR015425 | - | |
| Aip02g01602 | 214 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 57 | 125 | IPR036291 | - | |
| Aip02g01602 | 214 | Gene3D | - | 5 | 93 | - | - | |
| Aip02g01602 | 214 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 24 | 214 | IPR015425 | - | |
| Aip02g01602 | 214 | PANTHER | ALCOHOL DEHYDROGENASE-RELATED | 7 | 126 | - | - | |
| Aip02g01602 | 214 | SUPERFAMILY | GroES-like | 8 | 80 | IPR011032 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aip02g01602 | Aip-Chr2 | 64272043 | 64273977 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Aip02g01602 | 125 | 214 | FH2 protein (formin) Gene Family | AT5G67470 | 76.667 | 1.96e-40 | 144 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aip02g01602 | K00121 | - | gmx:100798341 | 182.57 |